Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.09□□□□□ -0.31
CASP6P55212 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 OR2K2-202ENST00000374428 1038 ntBASIC13.09□□□□□ -0.31
CASP6P55212 Z69890.1-201ENST00000382990 339 ntBASIC13.09□□□□□ -0.31
CASP6P55212 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.09□□□□□ -0.31
CASP6P55212 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.09□□□□□ -0.31
CASP6P55212 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.09□□□□□ -0.31
CASP6P55212 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.09□□□□□ -0.31
CASP6P55212 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.09□□□□□ -0.31
CASP6P55212 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC13.09□□□□□ -0.31
CASP6P55212 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC13.09□□□□□ -0.31
CASP6P55212 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.09□□□□□ -0.31
CASP6P55212 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.09□□□□□ -0.31
CASP6P55212 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.09□□□□□ -0.31
CASP6P55212 AC131206.1-201ENST00000538078 1211 ntBASIC13.09□□□□□ -0.31
CASP6P55212 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.09□□□□□ -0.31
CASP6P55212 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.09□□□□□ -0.31
CASP6P55212 AC242376.2-201ENST00000619355 883 ntBASIC13.09□□□□□ -0.31
CASP6P55212 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.09□□□□□ -0.31
CASP6P55212 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
CASP6P55212 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.09□□□□□ -0.31
CASP6P55212 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
CASP6P55212 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CASP6P55212 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.09□□□□□ -0.31
CASP6P55212 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.09□□□□□ -0.31
CASP6P55212 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
CASP6P55212 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
CASP6P55212 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.09□□□□□ -0.31
CASP6P55212 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CASP6P55212 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
CASP6P55212 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.08□□□□□ -0.32
CASP6P55212 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CASP6P55212 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
CASP6P55212 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.08□□□□□ -0.32
CASP6P55212 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.08□□□□□ -0.32
CASP6P55212 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 AL365203.3-201ENST00000609742 2057 ntBASIC13.08□□□□□ -0.32
CASP6P55212 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.08□□□□□ -0.32
CASP6P55212 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.08□□□□□ -0.32
CASP6P55212 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.08□□□□□ -0.32
CASP6P55212 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.08□□□□□ -0.32
CASP6P55212 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CASP6P55212 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.08□□□□□ -0.32
CASP6P55212 AL645933.1-201ENST00000440087 609 ntBASIC13.08□□□□□ -0.32
CASP6P55212 AC114501.1-201ENST00000445949 172 ntBASIC13.08□□□□□ -0.32
CASP6P55212 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.08□□□□□ -0.32
CASP6P55212 DUTP3-201ENST00000450025 415 ntBASIC13.08□□□□□ -0.32
CASP6P55212 AC130709.1-201ENST00000484779 1212 ntBASIC13.08□□□□□ -0.32
CASP6P55212 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.08□□□□□ -0.32
CASP6P55212 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.08□□□□□ -0.32
CASP6P55212 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.08□□□□□ -0.32
CASP6P55212 MIR3677-201ENST00000578964 60 ntBASIC13.08□□□□□ -0.32
CASP6P55212 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.08□□□□□ -0.32
CASP6P55212 AC007326.1-201ENST00000604539 458 ntBASIC13.08□□□□□ -0.32
CASP6P55212 AC007718.1-201ENST00000621078 280 ntBASIC13.08□□□□□ -0.32
CASP6P55212 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC13.08□□□□□ -0.32
CASP6P55212 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.08□□□□□ -0.32
CASP6P55212 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.08□□□□□ -0.32
CASP6P55212 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.08□□□□□ -0.32
CASP6P55212 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.08□□□□□ -0.32
CASP6P55212 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.08□□□□□ -0.32
CASP6P55212 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CASP6P55212 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.08□□□□□ -0.32
CASP6P55212 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CASP6P55212 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CASP6P55212 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.08□□□□□ -0.32
CASP6P55212 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CASP6P55212 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC13.08□□□□□ -0.32
CASP6P55212 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms