Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.06□□□□□ -0.16
PDX1P52945 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.06□□□□□ -0.16
PDX1P52945 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDX1P52945 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.06□□□□□ -0.16
PDX1P52945 AC015656.1-201ENST00000624209 3578 ntBASIC14.06□□□□□ -0.16
PDX1P52945 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDX1P52945 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDX1P52945 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PDX1P52945 SBF1P1-201ENST00000444527 5631 ntBASIC14.06□□□□□ -0.16
PDX1P52945 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.06□□□□□ -0.16
PDX1P52945 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDX1P52945 OR2I1P-210ENST00000642037 4691 ntBASIC14.06□□□□□ -0.16
PDX1P52945 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PDX1P52945 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDX1P52945 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDX1P52945 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
PDX1P52945 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.05□□□□□ -0.16
PDX1P52945 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PDX1P52945 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.05□□□□□ -0.16
PDX1P52945 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.05□□□□□ -0.16
PDX1P52945 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.05□□□□□ -0.16
PDX1P52945 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.05□□□□□ -0.16
PDX1P52945 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.05□□□□□ -0.16
PDX1P52945 AC008723.1-201ENST00000506922 207 ntBASIC14.05□□□□□ -0.16
PDX1P52945 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.05□□□□□ -0.16
PDX1P52945 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PDX1P52945 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.05□□□□□ -0.16
PDX1P52945 RBM8B-201ENST00000555532 525 ntBASIC14.05□□□□□ -0.16
PDX1P52945 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PDX1P52945 MIR6769A-201ENST00000617340 73 ntBASIC14.05□□□□□ -0.16
PDX1P52945 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 AC092299.1-201ENST00000632679 757 ntBASIC14.05□□□□□ -0.16
PDX1P52945 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PDX1P52945 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.05□□□□□ -0.16
PDX1P52945 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.05□□□□□ -0.16
PDX1P52945 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PDX1P52945 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.05□□□□□ -0.16
PDX1P52945 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.05□□□□□ -0.16
PDX1P52945 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.05□□□□□ -0.16
PDX1P52945 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
PDX1P52945 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDX1P52945 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PDX1P52945 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PDX1P52945 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PDX1P52945 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.04□□□□□ -0.16
PDX1P52945 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.04□□□□□ -0.16
PDX1P52945 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.04□□□□□ -0.16
PDX1P52945 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.04□□□□□ -0.16
PDX1P52945 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.04□□□□□ -0.16
PDX1P52945 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PDX1P52945 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 AP000356.3-201ENST00000382243 753 ntBASIC14.04□□□□□ -0.16
PDX1P52945 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PDX1P52945 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.04□□□□□ -0.16
PDX1P52945 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.04□□□□□ -0.16
PDX1P52945 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.04□□□□□ -0.16
PDX1P52945 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.04□□□□□ -0.16
PDX1P52945 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.04□□□□□ -0.16
PDX1P52945 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.04□□□□□ -0.16
PDX1P52945 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.04□□□□□ -0.16
PDX1P52945 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.04□□□□□ -0.16
PDX1P52945 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PDX1P52945 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.04□□□□□ -0.16
PDX1P52945 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PDX1P52945 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.04□□□□□ -0.16
PDX1P52945 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDX1P52945 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms