Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MDH1P40925 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.53□□□□□ -0.08
MDH1P40925 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
MDH1P40925 HLA-A-201ENST00000376802 1334 ntBASIC14.53□□□□□ -0.08
MDH1P40925 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.53□□□□□ -0.08
MDH1P40925 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.53□□□□□ -0.08
MDH1P40925 KRT18P32-201ENST00000424695 1287 ntBASIC14.53□□□□□ -0.08
MDH1P40925 AC005237.2-201ENST00000434368 219 ntBASIC14.53□□□□□ -0.08
MDH1P40925 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.53□□□□□ -0.08
MDH1P40925 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.53□□□□□ -0.08
MDH1P40925 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.53□□□□□ -0.08
MDH1P40925 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.53□□□□□ -0.08
MDH1P40925 MIR4453-201ENST00000584019 89 ntBASIC14.53□□□□□ -0.08
MDH1P40925 AC009955.4-201ENST00000597192 544 ntBASIC14.53□□□□□ -0.08
MDH1P40925 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 FAM197Y3-203ENST00000618346 717 ntBASIC14.53□□□□□ -0.08
MDH1P40925 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.53□□□□□ -0.08
MDH1P40925 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.53□□□□□ -0.08
MDH1P40925 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.53□□□□□ -0.08
MDH1P40925 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.53□□□□□ -0.08
MDH1P40925 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
MDH1P40925 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC14.53□□□□□ -0.08
MDH1P40925 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MDH1P40925 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.52□□□□□ -0.08
MDH1P40925 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MDH1P40925 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC14.52□□□□□ -0.08
MDH1P40925 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MDH1P40925 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MDH1P40925 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.52□□□□□ -0.08
MDH1P40925 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC14.52□□□□□ -0.08
MDH1P40925 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MDH1P40925 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MDH1P40925 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC14.52□□□□□ -0.08
MDH1P40925 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC14.52□□□□□ -0.08
MDH1P40925 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MDH1P40925 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MDH1P40925 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MDH1P40925 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
MDH1P40925 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
MDH1P40925 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.52□□□□□ -0.08
MDH1P40925 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MDH1P40925 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.52□□□□□ -0.08
MDH1P40925 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
MDH1P40925 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MDH1P40925 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
MDH1P40925 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MDH1P40925 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MDH1P40925 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
MDH1P40925 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MDH1P40925 SPDYE14P-201ENST00000442619 822 ntBASIC14.52□□□□□ -0.09
MDH1P40925 AC009078.2-202ENST00000463353 338 ntBASIC14.52□□□□□ -0.09
MDH1P40925 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.52□□□□□ -0.09
MDH1P40925 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.52□□□□□ -0.09
MDH1P40925 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
MDH1P40925 AC026410.3-201ENST00000514280 936 ntBASIC14.52□□□□□ -0.09
MDH1P40925 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.52□□□□□ -0.09
MDH1P40925 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.52□□□□□ -0.09
MDH1P40925 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.52□□□□□ -0.09
MDH1P40925 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
MDH1P40925 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
MDH1P40925 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.52□□□□□ -0.09
MDH1P40925 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MDH1P40925 AL603764.1-201ENST00000636452 321 ntBASIC14.52□□□□□ -0.09
MDH1P40925 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MDH1P40925 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MDH1P40925 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MDH1P40925 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
MDH1P40925 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.52□□□□□ -0.09
MDH1P40925 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MDH1P40925 LINC00638-201ENST00000555578 2518 ntBASIC14.52□□□□□ -0.09
MDH1P40925 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MDH1P40925 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MDH1P40925 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.52□□□□□ -0.09
MDH1P40925 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MDH1P40925 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MDH1P40925 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MDH1P40925 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MDH1P40925 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
MDH1P40925 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC14.51□□□□□ -0.09
MDH1P40925 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
MDH1P40925 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.51□□□□□ -0.09
MDH1P40925 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.51□□□□□ -0.09
MDH1P40925 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
MDH1P40925 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms