Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
FDFT1P37268 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
FDFT1P37268 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.78□□□□□ -0.04
FDFT1P37268 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.78□□□□□ -0.04
FDFT1P37268 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.78□□□□□ -0.04
FDFT1P37268 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.78□□□□□ -0.04
FDFT1P37268 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FDFT1P37268 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FDFT1P37268 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
FDFT1P37268 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.77□□□□□ -0.04
FDFT1P37268 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FDFT1P37268 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
FDFT1P37268 TMBIM7P-202ENST00000641474 1516 ntBASIC14.77□□□□□ -0.04
FDFT1P37268 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FDFT1P37268 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
FDFT1P37268 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
FDFT1P37268 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
FDFT1P37268 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FDFT1P37268 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
FDFT1P37268 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FDFT1P37268 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.77□□□□□ -0.04
FDFT1P37268 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.04
FDFT1P37268 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FDFT1P37268 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
FDFT1P37268 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.77□□□□□ -0.04
FDFT1P37268 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
FDFT1P37268 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FDFT1P37268 KRT17P7-201ENST00000451704 1104 ntBASIC14.77□□□□□ -0.05
FDFT1P37268 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.77□□□□□ -0.05
FDFT1P37268 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.77□□□□□ -0.05
FDFT1P37268 AC079316.1-201ENST00000548397 411 ntBASIC14.77□□□□□ -0.05
FDFT1P37268 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FDFT1P37268 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.77□□□□□ -0.05
FDFT1P37268 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.77□□□□□ -0.05
FDFT1P37268 BAP1-211ENST00000615113 489 ntBASIC14.77□□□□□ -0.05
FDFT1P37268 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.77□□□□□ -0.05
FDFT1P37268 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.77□□□□□ -0.05
FDFT1P37268 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.77□□□□□ -0.05
FDFT1P37268 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FDFT1P37268 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
FDFT1P37268 AL356585.2-201ENST00000625078 2396 ntBASIC14.77□□□□□ -0.05
FDFT1P37268 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
FDFT1P37268 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FDFT1P37268 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.77□□□□□ -0.05
FDFT1P37268 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.77□□□□□ -0.05
FDFT1P37268 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.77□□□□□ -0.05
FDFT1P37268 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
FDFT1P37268 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FDFT1P37268 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
FDFT1P37268 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.76□□□□□ -0.05
FDFT1P37268 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 AC111170.3-201ENST00000624282 2464 ntBASIC14.76□□□□□ -0.05
FDFT1P37268 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
FDFT1P37268 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
FDFT1P37268 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
FDFT1P37268 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.76□□□□□ -0.05
FDFT1P37268 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.76□□□□□ -0.05
FDFT1P37268 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.76□□□□□ -0.05
FDFT1P37268 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
FDFT1P37268 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
FDFT1P37268 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
FDFT1P37268 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 BOLA2P3-201ENST00000404566 256 ntBASIC14.76□□□□□ -0.05
FDFT1P37268 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.76□□□□□ -0.05
FDFT1P37268 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.76□□□□□ -0.05
FDFT1P37268 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.76□□□□□ -0.05
FDFT1P37268 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
FDFT1P37268 AL157407.1-201ENST00000435784 904 ntBASIC14.76□□□□□ -0.05
FDFT1P37268 AL645933.1-201ENST00000440087 609 ntBASIC14.76□□□□□ -0.05
FDFT1P37268 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.76□□□□□ -0.05
FDFT1P37268 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.76□□□□□ -0.05
FDFT1P37268 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.76□□□□□ -0.05
FDFT1P37268 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 AC023310.1-201ENST00000554836 735 ntBASIC14.76□□□□□ -0.05
FDFT1P37268 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.76□□□□□ -0.05
FDFT1P37268 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.76□□□□□ -0.05
FDFT1P37268 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.76□□□□□ -0.05
FDFT1P37268 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
FDFT1P37268 MIR3197-201ENST00000582241 73 ntBASIC14.76□□□□□ -0.05
FDFT1P37268 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.76□□□□□ -0.05
FDFT1P37268 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.76□□□□□ -0.05
FDFT1P37268 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FDFT1P37268 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms