Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPB2P35606 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
COPB2P35606 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.46■□□□□ 0.23
COPB2P35606 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
COPB2P35606 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COPB2P35606 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPB2P35606 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.46■□□□□ 0.23
COPB2P35606 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COPB2P35606 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPB2P35606 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPB2P35606 AL355334.1-201ENST00000417713 215 ntBASIC16.46■□□□□ 0.23
COPB2P35606 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.46■□□□□ 0.23
COPB2P35606 AL161932.2-201ENST00000435436 679 ntBASIC16.46■□□□□ 0.23
COPB2P35606 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.46■□□□□ 0.23
COPB2P35606 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.46■□□□□ 0.23
COPB2P35606 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
COPB2P35606 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.46■□□□□ 0.23
COPB2P35606 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.46■□□□□ 0.23
COPB2P35606 AC107464.3-201ENST00000609172 737 ntBASIC16.46■□□□□ 0.23
COPB2P35606 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.46■□□□□ 0.23
COPB2P35606 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPB2P35606 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPB2P35606 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COPB2P35606 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
COPB2P35606 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COPB2P35606 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPB2P35606 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COPB2P35606 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
COPB2P35606 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.46■□□□□ 0.22
COPB2P35606 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
COPB2P35606 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
COPB2P35606 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
COPB2P35606 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
COPB2P35606 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
COPB2P35606 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.45■□□□□ 0.22
COPB2P35606 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.45■□□□□ 0.22
COPB2P35606 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.45■□□□□ 0.22
COPB2P35606 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.45■□□□□ 0.22
COPB2P35606 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.45■□□□□ 0.22
COPB2P35606 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.45■□□□□ 0.22
COPB2P35606 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.45■□□□□ 0.22
COPB2P35606 ALG1L13P-202ENST00000519320 584 ntBASIC16.45■□□□□ 0.22
COPB2P35606 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.45■□□□□ 0.22
COPB2P35606 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.45■□□□□ 0.22
COPB2P35606 MIR2392-201ENST00000584881 84 ntBASIC16.45■□□□□ 0.22
COPB2P35606 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
COPB2P35606 AC105137.3-201ENST00000617588 984 ntBASIC16.45■□□□□ 0.22
COPB2P35606 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.45■□□□□ 0.22
COPB2P35606 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.45■□□□□ 0.22
COPB2P35606 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
COPB2P35606 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
COPB2P35606 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COPB2P35606 MYADML-201ENST00000474610 2147 ntBASIC16.45■□□□□ 0.22
COPB2P35606 BRD7P5-201ENST00000299197 1822 ntBASIC16.45■□□□□ 0.22
COPB2P35606 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COPB2P35606 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.45■□□□□ 0.22
COPB2P35606 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.44■□□□□ 0.22
COPB2P35606 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.44■□□□□ 0.22
COPB2P35606 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 AC090502.4-201ENST00000551714 1386 ntBASIC16.44■□□□□ 0.22
COPB2P35606 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPB2P35606 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.44■□□□□ 0.22
COPB2P35606 OR8T1P-201ENST00000421347 918 ntBASIC16.44■□□□□ 0.22
COPB2P35606 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.44■□□□□ 0.22
COPB2P35606 AC114501.1-201ENST00000445949 172 ntBASIC16.44■□□□□ 0.22
COPB2P35606 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.44■□□□□ 0.22
COPB2P35606 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.44■□□□□ 0.22
COPB2P35606 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.44■□□□□ 0.22
COPB2P35606 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.44■□□□□ 0.22
COPB2P35606 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms