Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT9P35527 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
KRT9P35527 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
KRT9P35527 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
KRT9P35527 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
KRT9P35527 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT9P35527 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
KRT9P35527 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.87■□□□□ 0.13
KRT9P35527 AC092933.1-201ENST00000393644 945 ntBASIC15.87■□□□□ 0.13
KRT9P35527 TMEM14DP-201ENST00000422205 345 ntBASIC15.87■□□□□ 0.13
KRT9P35527 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT9P35527 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 PUDPP3-201ENST00000445368 636 ntBASIC15.87■□□□□ 0.13
KRT9P35527 COX20P2-201ENST00000452636 358 ntBASIC15.87■□□□□ 0.13
KRT9P35527 ALG3P1-201ENST00000508806 1114 ntBASIC15.87■□□□□ 0.13
KRT9P35527 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.87■□□□□ 0.13
KRT9P35527 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.87■□□□□ 0.13
KRT9P35527 GNRHR2-203ENST00000581100 1187 ntBASIC15.87■□□□□ 0.13
KRT9P35527 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 IGHV3-72-202ENST00000621503 303 ntBASIC15.87■□□□□ 0.13
KRT9P35527 AC105233.6-201ENST00000642093 218 ntBASIC15.87■□□□□ 0.13
KRT9P35527 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 AL031595.1-201ENST00000623969 4709 ntBASIC15.87■□□□□ 0.13
KRT9P35527 AC005562.1-201ENST00000583030 3219 ntBASIC15.87■□□□□ 0.13
KRT9P35527 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 AC064801.2-201ENST00000625052 1303 ntBASIC15.87■□□□□ 0.13
KRT9P35527 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT9P35527 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.87■□□□□ 0.13
KRT9P35527 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT9P35527 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT9P35527 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.87■□□□□ 0.13
KRT9P35527 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
KRT9P35527 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT9P35527 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
KRT9P35527 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT9P35527 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT9P35527 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.86■□□□□ 0.13
KRT9P35527 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT9P35527 AL022313.4-201ENST00000562756 2046 ntBASIC15.86■□□□□ 0.13
KRT9P35527 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 AL035633.1-201ENST00000406139 838 ntBASIC15.86■□□□□ 0.13
KRT9P35527 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 AC016694.1-201ENST00000434179 700 ntBASIC15.86■□□□□ 0.13
KRT9P35527 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT9P35527 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.86■□□□□ 0.13
KRT9P35527 AL391280.1-201ENST00000506969 1062 ntBASIC15.86■□□□□ 0.13
KRT9P35527 RNA5SP486-201ENST00000515961 83 ntBASIC15.86■□□□□ 0.13
KRT9P35527 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.86■□□□□ 0.13
KRT9P35527 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
KRT9P35527 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.86■□□□□ 0.13
KRT9P35527 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.86■□□□□ 0.13
KRT9P35527 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT9P35527 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms