Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CKS2P33552 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
CKS2P33552 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CKS2P33552 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.69□□□□□ -0.7
CKS2P33552 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CKS2P33552 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.69□□□□□ -0.7
CKS2P33552 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 AL391647.1-201ENST00000395664 511 ntBASIC10.69□□□□□ -0.7
CKS2P33552 RPP21-221ENST00000428040 594 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS2P33552 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC10.69□□□□□ -0.7
CKS2P33552 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC10.69□□□□□ -0.7
CKS2P33552 ACTG1P14-201ENST00000446382 1122 ntBASIC10.69□□□□□ -0.7
CKS2P33552 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC10.69□□□□□ -0.7
CKS2P33552 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.69□□□□□ -0.7
CKS2P33552 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC10.69□□□□□ -0.7
CKS2P33552 AL662844.1-201ENST00000546340 181 ntBASIC10.69□□□□□ -0.7
CKS2P33552 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.69□□□□□ -0.7
CKS2P33552 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC10.69□□□□□ -0.7
CKS2P33552 KRT18P8-201ENST00000581937 1246 ntBASIC10.69□□□□□ -0.7
CKS2P33552 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC10.69□□□□□ -0.7
CKS2P33552 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.69□□□□□ -0.7
CKS2P33552 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
CKS2P33552 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS2P33552 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CKS2P33552 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
CKS2P33552 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
CKS2P33552 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
CKS2P33552 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 PCDHA6-201ENST00000378126 3267 ntBASIC10.69□□□□□ -0.7
CKS2P33552 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CKS2P33552 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC10.69□□□□□ -0.7
CKS2P33552 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 POM121L14P-201ENST00000406100 1558 ntBASIC10.69□□□□□ -0.7
CKS2P33552 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
CKS2P33552 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CKS2P33552 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS2P33552 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC10.68□□□□□ -0.7
CKS2P33552 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
CKS2P33552 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS2P33552 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
CKS2P33552 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
CKS2P33552 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CKS2P33552 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS2P33552 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 LBH-204ENST00000406087 559 ntTSL 4 BASIC10.68□□□□□ -0.7
CKS2P33552 KRT18P32-201ENST00000424695 1287 ntBASIC10.68□□□□□ -0.7
CKS2P33552 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 FAAHP1-202ENST00000446499 1238 ntBASIC10.68□□□□□ -0.7
CKS2P33552 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS2P33552 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.68□□□□□ -0.7
CKS2P33552 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC10.68□□□□□ -0.7
CKS2P33552 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CKS2P33552 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS2P33552 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC10.68□□□□□ -0.7
CKS2P33552 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
CKS2P33552 AL691432.3-201ENST00000621860 400 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms