Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.34□□□□□ -0.27
ABCD3P28288 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
ABCD3P28288 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.33□□□□□ -0.27
ABCD3P28288 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ABCD3P28288 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.33□□□□□ -0.27
ABCD3P28288 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
ABCD3P28288 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ABCD3P28288 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ABCD3P28288 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.33□□□□□ -0.28
ABCD3P28288 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ABCD3P28288 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ABCD3P28288 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ABCD3P28288 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.33□□□□□ -0.28
ABCD3P28288 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.33□□□□□ -0.28
ABCD3P28288 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.33□□□□□ -0.28
ABCD3P28288 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.33□□□□□ -0.28
ABCD3P28288 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.33□□□□□ -0.28
ABCD3P28288 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.33□□□□□ -0.28
ABCD3P28288 AL645939.5-201ENST00000606834 243 ntBASIC13.33□□□□□ -0.28
ABCD3P28288 AL591471.1-201ENST00000621855 229 ntBASIC13.33□□□□□ -0.28
ABCD3P28288 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ABCD3P28288 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 CICP20-201ENST00000443330 2801 ntBASIC13.33□□□□□ -0.28
ABCD3P28288 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.33□□□□□ -0.28
ABCD3P28288 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.33□□□□□ -0.28
ABCD3P28288 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.33□□□□□ -0.28
ABCD3P28288 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCD3P28288 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
ABCD3P28288 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.33□□□□□ -0.28
ABCD3P28288 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.33□□□□□ -0.28
ABCD3P28288 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
ABCD3P28288 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
ABCD3P28288 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.32□□□□□ -0.28
ABCD3P28288 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.32□□□□□ -0.28
ABCD3P28288 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ABCD3P28288 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 AC027601.5-201ENST00000624065 2482 ntBASIC13.32□□□□□ -0.28
ABCD3P28288 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ABCD3P28288 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.32□□□□□ -0.28
ABCD3P28288 AC020910.6-201ENST00000623084 1459 ntBASIC13.32□□□□□ -0.28
ABCD3P28288 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.32□□□□□ -0.28
ABCD3P28288 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.32□□□□□ -0.28
ABCD3P28288 RN7SKP214-201ENST00000364208 315 ntBASIC13.32□□□□□ -0.28
ABCD3P28288 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ABCD3P28288 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
ABCD3P28288 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
ABCD3P28288 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.32□□□□□ -0.28
ABCD3P28288 FNTAP2-201ENST00000430308 634 ntBASIC13.32□□□□□ -0.28
ABCD3P28288 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.32□□□□□ -0.28
ABCD3P28288 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.32□□□□□ -0.28
ABCD3P28288 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.32□□□□□ -0.28
ABCD3P28288 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.32□□□□□ -0.28
ABCD3P28288 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.32□□□□□ -0.28
ABCD3P28288 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.32□□□□□ -0.28
ABCD3P28288 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.32□□□□□ -0.28
ABCD3P28288 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.32□□□□□ -0.28
ABCD3P28288 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.32□□□□□ -0.28
ABCD3P28288 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.32□□□□□ -0.28
ABCD3P28288 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ABCD3P28288 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.32□□□□□ -0.28
ABCD3P28288 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
ABCD3P28288 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ABCD3P28288 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.32□□□□□ -0.28
ABCD3P28288 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.32□□□□□ -0.28
ABCD3P28288 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.32□□□□□ -0.28
ABCD3P28288 AL157813.1-201ENST00000612996 587 ntBASIC13.32□□□□□ -0.28
ABCD3P28288 AC090386.2-201ENST00000623010 1039 ntBASIC13.32□□□□□ -0.28
ABCD3P28288 AC100757.4-201ENST00000626934 759 ntBASIC13.32□□□□□ -0.28
ABCD3P28288 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.32□□□□□ -0.28
ABCD3P28288 AL805961.1-203ENST00000641078 1258 ntBASIC13.32□□□□□ -0.28
ABCD3P28288 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.32□□□□□ -0.28
ABCD3P28288 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ABCD3P28288 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms