Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 DDX12P-201ENST00000432996 2947 ntBASIC12.57□□□□□ -0.4
HLA-DMAP28067 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 AC004461.1-201ENST00000412461 403 ntBASIC12.57□□□□□ -0.4
HLA-DMAP28067 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 RN7SL618P-201ENST00000477850 296 ntBASIC12.57□□□□□ -0.4
HLA-DMAP28067 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 AL512361.1-201ENST00000554200 418 ntBASIC12.57□□□□□ -0.4
HLA-DMAP28067 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 BX640515.1-201ENST00000617215 977 ntBASIC12.57□□□□□ -0.4
HLA-DMAP28067 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 AL513210.1-201ENST00000629608 234 ntBASIC12.57□□□□□ -0.4
HLA-DMAP28067 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 AC093525.8-201ENST00000624099 1342 ntBASIC12.57□□□□□ -0.4
HLA-DMAP28067 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 AL021155.1-201ENST00000438808 2637 ntBASIC12.57□□□□□ -0.4
HLA-DMAP28067 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DMAP28067 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 AP003969.2-201ENST00000623739 2275 ntBASIC12.57□□□□□ -0.4
HLA-DMAP28067 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DMAP28067 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 AC102953.2-201ENST00000609755 3026 ntBASIC12.56□□□□□ -0.4
HLA-DMAP28067 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 TPM4P1-201ENST00000436100 807 ntBASIC12.56□□□□□ -0.4
HLA-DMAP28067 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 KRT126P-201ENST00000549467 1181 ntBASIC12.56□□□□□ -0.4
HLA-DMAP28067 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 AC051619.7-201ENST00000568314 623 ntBASIC12.56□□□□□ -0.4
HLA-DMAP28067 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 MTDHP5-201ENST00000598980 586 ntBASIC12.56□□□□□ -0.4
HLA-DMAP28067 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 PCDHA6-201ENST00000378126 3267 ntBASIC12.56□□□□□ -0.4
HLA-DMAP28067 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 TUBB8P4-201ENST00000511806 1324 ntBASIC12.56□□□□□ -0.4
HLA-DMAP28067 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DMAP28067 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DMAP28067 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms