Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 AP001267.2-201ENST00000532619 2086 ntBASIC12.23□□□□□ -0.45
COL8A2P25067 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.23□□□□□ -0.45
COL8A2P25067 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.23□□□□□ -0.45
COL8A2P25067 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
COL8A2P25067 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
COL8A2P25067 AC015909.3-201ENST00000572855 1794 ntBASIC12.23□□□□□ -0.45
COL8A2P25067 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 LINC01165-201ENST00000445190 1623 ntBASIC12.22□□□□□ -0.45
COL8A2P25067 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.22□□□□□ -0.45
COL8A2P25067 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.22□□□□□ -0.45
COL8A2P25067 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
COL8A2P25067 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
COL8A2P25067 MYADML-201ENST00000474610 2147 ntBASIC12.22□□□□□ -0.45
COL8A2P25067 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.22□□□□□ -0.45
COL8A2P25067 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
COL8A2P25067 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.22□□□□□ -0.45
COL8A2P25067 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.22□□□□□ -0.45
COL8A2P25067 TSPY25P-201ENST00000429463 745 ntBASIC12.22□□□□□ -0.45
COL8A2P25067 OR2R1P-201ENST00000441404 914 ntBASIC12.22□□□□□ -0.45
COL8A2P25067 EEF1DP6-201ENST00000449232 372 ntBASIC12.22□□□□□ -0.45
COL8A2P25067 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.22□□□□□ -0.45
COL8A2P25067 AC116345.2-201ENST00000512837 523 ntBASIC12.22□□□□□ -0.45
COL8A2P25067 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.22□□□□□ -0.45
COL8A2P25067 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.22□□□□□ -0.45
COL8A2P25067 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.22□□□□□ -0.45
COL8A2P25067 AC027237.1-201ENST00000560942 655 ntBASIC12.22□□□□□ -0.45
COL8A2P25067 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.22□□□□□ -0.45
COL8A2P25067 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.22□□□□□ -0.45
COL8A2P25067 MIR6769A-201ENST00000617340 73 ntBASIC12.22□□□□□ -0.45
COL8A2P25067 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
COL8A2P25067 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.22□□□□□ -0.45
COL8A2P25067 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.22□□□□□ -0.45
COL8A2P25067 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.22□□□□□ -0.45
COL8A2P25067 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
COL8A2P25067 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.22□□□□□ -0.45
COL8A2P25067 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.22□□□□□ -0.45
COL8A2P25067 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
COL8A2P25067 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 AC027601.5-201ENST00000624065 2482 ntBASIC12.21□□□□□ -0.45
COL8A2P25067 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.21□□□□□ -0.45
COL8A2P25067 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 AL928921.2-201ENST00000641325 2442 ntBASIC12.21□□□□□ -0.45
COL8A2P25067 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.21□□□□□ -0.45
COL8A2P25067 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.21□□□□□ -0.45
COL8A2P25067 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 AC215219.1-201ENST00000400706 1817 ntBASIC12.21□□□□□ -0.45
COL8A2P25067 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.21□□□□□ -0.45
COL8A2P25067 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.21□□□□□ -0.45
COL8A2P25067 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 FRMPD2B-201ENST00000431305 1347 ntBASIC12.21□□□□□ -0.45
COL8A2P25067 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms