Protein–RNA interactions for Protein: P17538

CTRB1, Chymotrypsinogen B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTRB1P17538 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.25□□□□□ -0.45
CTRB1P17538 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.25□□□□□ -0.45
CTRB1P17538 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 FP325330.2-201ENST00000624219 5630 ntBASIC12.25□□□□□ -0.45
CTRB1P17538 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.25□□□□□ -0.45
CTRB1P17538 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CTRB1P17538 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.25□□□□□ -0.45
CTRB1P17538 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.25□□□□□ -0.45
CTRB1P17538 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CTRB1P17538 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.25□□□□□ -0.45
CTRB1P17538 METTL21AP1-201ENST00000438852 635 ntBASIC12.25□□□□□ -0.45
CTRB1P17538 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.25□□□□□ -0.45
CTRB1P17538 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.25□□□□□ -0.45
CTRB1P17538 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.25□□□□□ -0.45
CTRB1P17538 AC044860.1-202ENST00000559481 777 ntBASIC12.25□□□□□ -0.45
CTRB1P17538 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.25□□□□□ -0.45
CTRB1P17538 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.25□□□□□ -0.45
CTRB1P17538 AL590560.3-201ENST00000623350 461 ntBASIC12.25□□□□□ -0.45
CTRB1P17538 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.25□□□□□ -0.45
CTRB1P17538 KRT18P28-201ENST00000453838 1332 ntBASIC12.25□□□□□ -0.45
CTRB1P17538 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.25□□□□□ -0.45
CTRB1P17538 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 AL121723.1-201ENST00000445194 1519 ntBASIC12.25□□□□□ -0.45
CTRB1P17538 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.25□□□□□ -0.45
CTRB1P17538 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.25□□□□□ -0.45
CTRB1P17538 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CTRB1P17538 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CTRB1P17538 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CTRB1P17538 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTRB1P17538 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.24□□□□□ -0.45
CTRB1P17538 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CTRB1P17538 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CTRB1P17538 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.24□□□□□ -0.45
CTRB1P17538 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
CTRB1P17538 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.24□□□□□ -0.45
CTRB1P17538 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 MIR943-201ENST00000401286 94 ntBASIC12.24□□□□□ -0.45
CTRB1P17538 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.24□□□□□ -0.45
CTRB1P17538 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.24□□□□□ -0.45
CTRB1P17538 GHSR-202ENST00000427970 912 ntBASIC12.24□□□□□ -0.45
CTRB1P17538 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 AC241585.1-201ENST00000433527 519 ntBASIC12.24□□□□□ -0.45
CTRB1P17538 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
CTRB1P17538 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.24□□□□□ -0.45
CTRB1P17538 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.24□□□□□ -0.45
CTRB1P17538 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC12.24□□□□□ -0.45
CTRB1P17538 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CTRB1P17538 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CTRB1P17538 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.24□□□□□ -0.45
CTRB1P17538 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms