Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 AL354877.1-201ENST00000424412 413 ntBASIC12.98□□□□□ -0.33
HLA-DOBP13765 FAM21FP-201ENST00000426241 1131 ntBASIC12.98□□□□□ -0.33
HLA-DOBP13765 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 ATP5G2P4-201ENST00000442175 420 ntBASIC12.98□□□□□ -0.33
HLA-DOBP13765 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 AC005962.1-201ENST00000584100 773 ntBASIC12.98□□□□□ -0.33
HLA-DOBP13765 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 AC090643.2-201ENST00000623442 2029 ntBASIC12.98□□□□□ -0.33
HLA-DOBP13765 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
HLA-DOBP13765 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 RPL13AP20-201ENST00000459725 609 ntBASIC12.97□□□□□ -0.33
HLA-DOBP13765 RPSAP36-202ENST00000494591 1261 ntBASIC12.97□□□□□ -0.33
HLA-DOBP13765 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.97□□□□□ -0.33
HLA-DOBP13765 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 RBM8B-201ENST00000555532 525 ntBASIC12.97□□□□□ -0.33
HLA-DOBP13765 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 AC005730.2-201ENST00000564549 1184 ntBASIC12.97□□□□□ -0.33
HLA-DOBP13765 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms