Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.39□□□□□ -0.27
BMP4P12644 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.39□□□□□ -0.27
BMP4P12644 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.39□□□□□ -0.27
BMP4P12644 BRI3BPP1-201ENST00000594224 787 ntBASIC13.39□□□□□ -0.27
BMP4P12644 AC133552.6-201ENST00000613406 534 ntBASIC13.39□□□□□ -0.27
BMP4P12644 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.39□□□□□ -0.27
BMP4P12644 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.39□□□□□ -0.27
BMP4P12644 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.39□□□□□ -0.27
BMP4P12644 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.39□□□□□ -0.27
BMP4P12644 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
BMP4P12644 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.39□□□□□ -0.27
BMP4P12644 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.39□□□□□ -0.27
BMP4P12644 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.39□□□□□ -0.27
BMP4P12644 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.39□□□□□ -0.27
BMP4P12644 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
BMP4P12644 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.38□□□□□ -0.27
BMP4P12644 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.38□□□□□ -0.27
BMP4P12644 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 AC106818.1-201ENST00000623223 3242 ntBASIC13.38□□□□□ -0.27
BMP4P12644 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
BMP4P12644 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
BMP4P12644 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
BMP4P12644 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
BMP4P12644 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.38□□□□□ -0.27
BMP4P12644 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.38□□□□□ -0.27
BMP4P12644 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
BMP4P12644 C1QBPP1-201ENST00000400117 770 ntBASIC13.38□□□□□ -0.27
BMP4P12644 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
BMP4P12644 AL355864.2-201ENST00000447420 863 ntBASIC13.38□□□□□ -0.27
BMP4P12644 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.38□□□□□ -0.27
BMP4P12644 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.38□□□□□ -0.27
BMP4P12644 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.38□□□□□ -0.27
BMP4P12644 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.38□□□□□ -0.27
BMP4P12644 TDH-203ENST00000531764 1110 ntBASIC13.38□□□□□ -0.27
BMP4P12644 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
BMP4P12644 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.38□□□□□ -0.27
BMP4P12644 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.38□□□□□ -0.27
BMP4P12644 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.38□□□□□ -0.27
BMP4P12644 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 AC233724.13-201ENST00000598383 410 ntBASIC13.38□□□□□ -0.27
BMP4P12644 BNIP3P41-202ENST00000616656 861 ntBASIC13.38□□□□□ -0.27
BMP4P12644 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.38□□□□□ -0.27
BMP4P12644 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.38□□□□□ -0.27
BMP4P12644 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.38□□□□□ -0.27
BMP4P12644 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.38□□□□□ -0.27
BMP4P12644 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
BMP4P12644 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
BMP4P12644 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BMP4P12644 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.38□□□□□ -0.27
BMP4P12644 AC072061.1-201ENST00000569710 2234 ntBASIC13.37□□□□□ -0.27
BMP4P12644 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.37□□□□□ -0.27
BMP4P12644 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.37□□□□□ -0.27
BMP4P12644 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.37□□□□□ -0.27
BMP4P12644 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.37□□□□□ -0.27
BMP4P12644 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
BMP4P12644 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
BMP4P12644 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.37□□□□□ -0.27
BMP4P12644 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.37□□□□□ -0.27
BMP4P12644 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.37□□□□□ -0.27
BMP4P12644 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
BMP4P12644 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms