Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLTAP09496 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLTAP09496 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLTAP09496 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CLTAP09496 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLTAP09496 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLTAP09496 CYP4F23P-201ENST00000593402 1579 ntBASIC15.87■□□□□ 0.13
CLTAP09496 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLTAP09496 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.87■□□□□ 0.13
CLTAP09496 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CLTAP09496 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLTAP09496 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.87■□□□□ 0.13
CLTAP09496 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLTAP09496 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.87■□□□□ 0.13
CLTAP09496 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.86■□□□□ 0.13
CLTAP09496 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CLTAP09496 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.86■□□□□ 0.13
CLTAP09496 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.86■□□□□ 0.13
CLTAP09496 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CLTAP09496 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CLTAP09496 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.86■□□□□ 0.13
CLTAP09496 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
CLTAP09496 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.86■□□□□ 0.13
CLTAP09496 AL008707.1-201ENST00000422498 534 ntBASIC15.86■□□□□ 0.13
CLTAP09496 AC011742.3-201ENST00000439053 820 ntBASIC15.86■□□□□ 0.13
CLTAP09496 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.86■□□□□ 0.13
CLTAP09496 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.86■□□□□ 0.13
CLTAP09496 AC009779.1-201ENST00000551138 283 ntBASIC15.86■□□□□ 0.13
CLTAP09496 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.86■□□□□ 0.13
CLTAP09496 AL645939.5-201ENST00000606834 243 ntBASIC15.86■□□□□ 0.13
CLTAP09496 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CLTAP09496 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.86■□□□□ 0.13
CLTAP09496 MIR6074-201ENST00000612054 107 ntBASIC15.86■□□□□ 0.13
CLTAP09496 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CLTAP09496 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.86■□□□□ 0.13
CLTAP09496 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
CLTAP09496 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 AC215219.1-201ENST00000400706 1817 ntBASIC15.86■□□□□ 0.13
CLTAP09496 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLTAP09496 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.86■□□□□ 0.13
CLTAP09496 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 TUBBP5-203ENST00000508529 1334 ntBASIC15.86■□□□□ 0.13
CLTAP09496 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.86■□□□□ 0.13
CLTAP09496 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.86■□□□□ 0.13
CLTAP09496 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.86■□□□□ 0.13
CLTAP09496 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CLTAP09496 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLTAP09496 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLTAP09496 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 AL133338.1-201ENST00000565695 1517 ntBASIC15.85■□□□□ 0.13
CLTAP09496 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.85■□□□□ 0.13
CLTAP09496 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CLTAP09496 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.85■□□□□ 0.13
CLTAP09496 AC078875.1-201ENST00000431907 724 ntBASIC15.85■□□□□ 0.13
CLTAP09496 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.85■□□□□ 0.13
CLTAP09496 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 HIST2H2BC-201ENST00000498492 580 ntBASIC15.85■□□□□ 0.13
CLTAP09496 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.85■□□□□ 0.13
CLTAP09496 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.85■□□□□ 0.13
CLTAP09496 SORD2P-201ENST00000558556 1069 ntBASIC15.85■□□□□ 0.13
CLTAP09496 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 NDUFV2P1-201ENST00000596415 907 ntBASIC15.85■□□□□ 0.13
CLTAP09496 AC026740.1-201ENST00000607068 791 ntBASIC15.85■□□□□ 0.13
CLTAP09496 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.85■□□□□ 0.13
CLTAP09496 AC100757.4-201ENST00000626934 759 ntBASIC15.85■□□□□ 0.13
CLTAP09496 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLTAP09496 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms