Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.25■□□□□ 0.35
CHGBP05060 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CHGBP05060 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CHGBP05060 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHGBP05060 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CHGBP05060 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.25■□□□□ 0.35
CHGBP05060 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHGBP05060 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHGBP05060 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.25■□□□□ 0.35
CHGBP05060 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHGBP05060 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.25■□□□□ 0.35
CHGBP05060 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.25■□□□□ 0.35
CHGBP05060 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHGBP05060 MIR3188-201ENST00000583494 85 ntBASIC17.25■□□□□ 0.35
CHGBP05060 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.25■□□□□ 0.35
CHGBP05060 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.25■□□□□ 0.35
CHGBP05060 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.25■□□□□ 0.35
CHGBP05060 AL591471.1-201ENST00000621855 229 ntBASIC17.25■□□□□ 0.35
CHGBP05060 AC015967.2-201ENST00000624092 234 ntBASIC17.25■□□□□ 0.35
CHGBP05060 AC006435.4-201ENST00000625037 234 ntBASIC17.25■□□□□ 0.35
CHGBP05060 AL356737.1-201ENST00000634391 234 ntBASIC17.25■□□□□ 0.35
CHGBP05060 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.25■□□□□ 0.35
CHGBP05060 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CHGBP05060 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHGBP05060 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHGBP05060 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHGBP05060 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHGBP05060 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHGBP05060 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHGBP05060 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.25■□□□□ 0.35
CHGBP05060 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.25■□□□□ 0.35
CHGBP05060 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CHGBP05060 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.24■□□□□ 0.35
CHGBP05060 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 TUBB8P4-201ENST00000511806 1324 ntBASIC17.24■□□□□ 0.35
CHGBP05060 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC17.24■□□□□ 0.35
CHGBP05060 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CHGBP05060 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CHGBP05060 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHGBP05060 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.24■□□□□ 0.35
CHGBP05060 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.24■□□□□ 0.35
CHGBP05060 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.24■□□□□ 0.35
CHGBP05060 AC245884.6-201ENST00000515672 1067 ntBASIC17.24■□□□□ 0.35
CHGBP05060 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 AC134698.3-201ENST00000523880 214 ntBASIC17.24■□□□□ 0.35
CHGBP05060 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.24■□□□□ 0.35
CHGBP05060 PHBP15-201ENST00000574228 665 ntBASIC17.24■□□□□ 0.35
CHGBP05060 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.24■□□□□ 0.35
CHGBP05060 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHGBP05060 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.24■□□□□ 0.35
CHGBP05060 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CHGBP05060 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC17.24■□□□□ 0.35
CHGBP05060 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHGBP05060 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.23■□□□□ 0.35
CHGBP05060 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CHGBP05060 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.23■□□□□ 0.35
CHGBP05060 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.23■□□□□ 0.35
CHGBP05060 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.23■□□□□ 0.35
CHGBP05060 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 AL662890.1-201ENST00000396818 632 ntBASIC17.23■□□□□ 0.35
CHGBP05060 CEP164P1-201ENST00000455142 418 ntBASIC17.23■□□□□ 0.35
CHGBP05060 DUX4L50-201ENST00000455245 715 ntBASIC17.23■□□□□ 0.35
CHGBP05060 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.23■□□□□ 0.35
CHGBP05060 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.23■□□□□ 0.35
CHGBP05060 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
CHGBP05060 AC012044.1-201ENST00000603431 297 ntBASIC17.23■□□□□ 0.35
CHGBP05060 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.23■□□□□ 0.35
CHGBP05060 AL353770.1-201ENST00000614915 403 ntBASIC17.23■□□□□ 0.35
CHGBP05060 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.23■□□□□ 0.35
CHGBP05060 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CHGBP05060 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 STX3-207ENST00000633708 3111 ntTSL 5 BASIC17.23■□□□□ 0.35
CHGBP05060 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.23■□□□□ 0.35
CHGBP05060 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms