Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.09□□□□□ -0.15
KRT6AP02538 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.09□□□□□ -0.15
KRT6AP02538 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 CICP8-201ENST00000455800 2813 ntBASIC14.09□□□□□ -0.15
KRT6AP02538 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.09□□□□□ -0.15
KRT6AP02538 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
KRT6AP02538 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.08□□□□□ -0.15
KRT6AP02538 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.08□□□□□ -0.15
KRT6AP02538 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
KRT6AP02538 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.08□□□□□ -0.15
KRT6AP02538 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
KRT6AP02538 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
KRT6AP02538 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.08□□□□□ -0.16
KRT6AP02538 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.08□□□□□ -0.16
KRT6AP02538 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.08□□□□□ -0.16
KRT6AP02538 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
KRT6AP02538 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
KRT6AP02538 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.08□□□□□ -0.16
KRT6AP02538 CNN2P8-201ENST00000421872 913 ntBASIC14.08□□□□□ -0.16
KRT6AP02538 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
KRT6AP02538 CICP12-201ENST00000455801 843 ntBASIC14.08□□□□□ -0.16
KRT6AP02538 AC007551.1-201ENST00000457394 519 ntBASIC14.08□□□□□ -0.16
KRT6AP02538 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
KRT6AP02538 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
KRT6AP02538 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.08□□□□□ -0.16
KRT6AP02538 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.08□□□□□ -0.16
KRT6AP02538 AC078819.1-201ENST00000547454 765 ntBASIC14.08□□□□□ -0.16
KRT6AP02538 AC012085.1-201ENST00000548270 765 ntBASIC14.08□□□□□ -0.16
KRT6AP02538 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.08□□□□□ -0.16
KRT6AP02538 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 ZACNP1-201ENST00000612259 710 ntBASIC14.08□□□□□ -0.16
KRT6AP02538 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 TCAF1P1-201ENST00000414990 2232 ntBASIC14.08□□□□□ -0.16
KRT6AP02538 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.08□□□□□ -0.16
KRT6AP02538 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
KRT6AP02538 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
KRT6AP02538 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.08□□□□□ -0.16
KRT6AP02538 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
KRT6AP02538 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
KRT6AP02538 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRT6AP02538 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.07□□□□□ -0.16
KRT6AP02538 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KRT6AP02538 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.07□□□□□ -0.16
KRT6AP02538 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
KRT6AP02538 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KRT6AP02538 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.07□□□□□ -0.16
KRT6AP02538 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.07□□□□□ -0.16
KRT6AP02538 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
KRT6AP02538 KRT43P-201ENST00000434019 910 ntBASIC14.07□□□□□ -0.16
KRT6AP02538 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.07□□□□□ -0.16
KRT6AP02538 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KRT6AP02538 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.07□□□□□ -0.16
KRT6AP02538 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.07□□□□□ -0.16
KRT6AP02538 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
KRT6AP02538 KRT90P-201ENST00000549264 1064 ntBASIC14.07□□□□□ -0.16
KRT6AP02538 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.07□□□□□ -0.16
KRT6AP02538 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.07□□□□□ -0.16
KRT6AP02538 AC073413.1-201ENST00000603927 732 ntBASIC14.07□□□□□ -0.16
KRT6AP02538 AC104506.1-201ENST00000609247 429 ntBASIC14.07□□□□□ -0.16
KRT6AP02538 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.07□□□□□ -0.16
KRT6AP02538 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.07□□□□□ -0.16
KRT6AP02538 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.07□□□□□ -0.16
KRT6AP02538 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
KRT6AP02538 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.07□□□□□ -0.16
KRT6AP02538 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms