Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.59□□□□□ -0.07
KDELR3O43731 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KDELR3O43731 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.59□□□□□ -0.07
KDELR3O43731 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KDELR3O43731 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KDELR3O43731 LINC00115-201ENST00000473798 1317 ntBASIC14.59□□□□□ -0.07
KDELR3O43731 BRD7P5-201ENST00000299197 1822 ntBASIC14.59□□□□□ -0.07
KDELR3O43731 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KDELR3O43731 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KDELR3O43731 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KDELR3O43731 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.58□□□□□ -0.07
KDELR3O43731 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KDELR3O43731 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
KDELR3O43731 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
KDELR3O43731 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KDELR3O43731 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
KDELR3O43731 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
KDELR3O43731 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
KDELR3O43731 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.58□□□□□ -0.08
KDELR3O43731 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
KDELR3O43731 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.58□□□□□ -0.08
KDELR3O43731 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 SLC25A24P2-201ENST00000415059 510 ntBASIC14.58□□□□□ -0.08
KDELR3O43731 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.58□□□□□ -0.08
KDELR3O43731 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 IGHJ2P-201ENST00000454480 60 ntBASIC14.58□□□□□ -0.08
KDELR3O43731 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
KDELR3O43731 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.58□□□□□ -0.08
KDELR3O43731 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.58□□□□□ -0.08
KDELR3O43731 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.58□□□□□ -0.08
KDELR3O43731 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.58□□□□□ -0.08
KDELR3O43731 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.58□□□□□ -0.08
KDELR3O43731 AC020922.3-201ENST00000595064 547 ntBASIC14.58□□□□□ -0.08
KDELR3O43731 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KDELR3O43731 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
KDELR3O43731 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
KDELR3O43731 SHMT1P1-201ENST00000419974 1312 ntBASIC14.58□□□□□ -0.08
KDELR3O43731 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
KDELR3O43731 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.58□□□□□ -0.08
KDELR3O43731 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.58□□□□□ -0.08
KDELR3O43731 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KDELR3O43731 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
KDELR3O43731 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KDELR3O43731 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
KDELR3O43731 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KDELR3O43731 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
KDELR3O43731 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
KDELR3O43731 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.57□□□□□ -0.08
KDELR3O43731 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KDELR3O43731 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KDELR3O43731 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
KDELR3O43731 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.57□□□□□ -0.08
KDELR3O43731 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KDELR3O43731 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KDELR3O43731 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
KDELR3O43731 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.57□□□□□ -0.08
KDELR3O43731 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KDELR3O43731 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
KDELR3O43731 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.57□□□□□ -0.08
KDELR3O43731 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.57□□□□□ -0.08
KDELR3O43731 BANF1P3-201ENST00000412556 261 ntBASIC14.57□□□□□ -0.08
KDELR3O43731 RN7SL258P-201ENST00000478664 300 ntBASIC14.57□□□□□ -0.08
KDELR3O43731 NUP210P1-202ENST00000504322 710 ntBASIC14.57□□□□□ -0.08
KDELR3O43731 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
KDELR3O43731 KRT8P1-201ENST00000557533 1207 ntBASIC14.57□□□□□ -0.08
KDELR3O43731 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
KDELR3O43731 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.57□□□□□ -0.08
KDELR3O43731 RN7SL574P-201ENST00000581512 297 ntBASIC14.57□□□□□ -0.08
KDELR3O43731 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.57□□□□□ -0.08
KDELR3O43731 LINC01783-202ENST00000614408 828 ntBASIC14.57□□□□□ -0.08
KDELR3O43731 BX284668.2-205ENST00000619677 828 ntBASIC14.57□□□□□ -0.08
KDELR3O43731 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.57□□□□□ -0.08
KDELR3O43731 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
KDELR3O43731 AC090643.2-201ENST00000623442 2029 ntBASIC14.57□□□□□ -0.08
KDELR3O43731 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
KDELR3O43731 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KDELR3O43731 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KDELR3O43731 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KDELR3O43731 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KDELR3O43731 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms