Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP2AO43633 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHMP2AO43633 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHMP2AO43633 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 AL596276.2-201ENST00000447525 331 ntBASIC16.26■□□□□ 0.19
CHMP2AO43633 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.26■□□□□ 0.19
CHMP2AO43633 AC024681.1-201ENST00000521917 487 ntBASIC16.26■□□□□ 0.19
CHMP2AO43633 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP2AO43633 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.26■□□□□ 0.19
CHMP2AO43633 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.26■□□□□ 0.19
CHMP2AO43633 AC021016.3-201ENST00000608367 477 ntBASIC16.26■□□□□ 0.19
CHMP2AO43633 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP2AO43633 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP2AO43633 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP2AO43633 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP2AO43633 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHMP2AO43633 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP2AO43633 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP2AO43633 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CHMP2AO43633 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP2AO43633 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP2AO43633 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP2AO43633 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP2AO43633 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP2AO43633 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP2AO43633 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHMP2AO43633 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP2AO43633 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP2AO43633 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.25■□□□□ 0.19
CHMP2AO43633 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.25■□□□□ 0.19
CHMP2AO43633 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP2AO43633 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP2AO43633 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP2AO43633 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP2AO43633 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP2AO43633 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.25■□□□□ 0.19
CHMP2AO43633 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP2AO43633 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP2AO43633 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.25■□□□□ 0.19
CHMP2AO43633 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP2AO43633 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP2AO43633 AC138627.1-207ENST00000641560 1006 ntBASIC16.25■□□□□ 0.19
CHMP2AO43633 LINC01165-201ENST00000445190 1623 ntBASIC16.25■□□□□ 0.19
CHMP2AO43633 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP2AO43633 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP2AO43633 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP2AO43633 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CHMP2AO43633 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP2AO43633 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CHMP2AO43633 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP2AO43633 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CHMP2AO43633 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.25■□□□□ 0.19
CHMP2AO43633 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CHMP2AO43633 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 HSPA8P5-201ENST00000456928 2069 ntBASIC16.24■□□□□ 0.19
CHMP2AO43633 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP2AO43633 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CHMP2AO43633 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.24■□□□□ 0.19
CHMP2AO43633 TSPY25P-201ENST00000429463 745 ntBASIC16.24■□□□□ 0.19
CHMP2AO43633 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.24■□□□□ 0.19
CHMP2AO43633 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.24■□□□□ 0.19
CHMP2AO43633 AC073150.1-201ENST00000450406 1084 ntBASIC16.24■□□□□ 0.19
CHMP2AO43633 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 NUP210P1-202ENST00000504322 710 ntBASIC16.24■□□□□ 0.19
CHMP2AO43633 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP2AO43633 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.24■□□□□ 0.19
CHMP2AO43633 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP2AO43633 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP2AO43633 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 AP002353.1-201ENST00000528257 1599 ntBASIC16.24■□□□□ 0.19
CHMP2AO43633 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CHMP2AO43633 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CHMP2AO43633 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.24■□□□□ 0.19
CHMP2AO43633 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CHMP2AO43633 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP2AO43633 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CHMP2AO43633 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CHMP2AO43633 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CHMP2AO43633 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.24■□□□□ 0.19
CHMP2AO43633 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP2AO43633 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP2AO43633 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms