Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
FOXN3O00409 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
FOXN3O00409 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FOXN3O00409 AC072061.1-201ENST00000569710 2234 ntBASIC15.46■□□□□ 0.07
FOXN3O00409 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXN3O00409 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXN3O00409 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXN3O00409 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXN3O00409 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FOXN3O00409 MIR658-201ENST00000385210 100 ntBASIC15.46■□□□□ 0.07
FOXN3O00409 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.46■□□□□ 0.07
FOXN3O00409 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
FOXN3O00409 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.46■□□□□ 0.07
FOXN3O00409 HSPB1P2-201ENST00000448722 546 ntBASIC15.46■□□□□ 0.07
FOXN3O00409 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.46■□□□□ 0.07
FOXN3O00409 RPSAP36-202ENST00000494591 1261 ntBASIC15.46■□□□□ 0.07
FOXN3O00409 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.46■□□□□ 0.07
FOXN3O00409 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.46■□□□□ 0.07
FOXN3O00409 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXN3O00409 AC005730.2-201ENST00000564549 1184 ntBASIC15.46■□□□□ 0.07
FOXN3O00409 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.46■□□□□ 0.07
FOXN3O00409 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.46■□□□□ 0.07
FOXN3O00409 AC009542.2-202ENST00000619004 1067 ntBASIC15.46■□□□□ 0.07
FOXN3O00409 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.46■□□□□ 0.07
FOXN3O00409 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.46■□□□□ 0.07
FOXN3O00409 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.46■□□□□ 0.07
FOXN3O00409 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.46■□□□□ 0.07
FOXN3O00409 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.46■□□□□ 0.07
FOXN3O00409 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
FOXN3O00409 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
FOXN3O00409 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
FOXN3O00409 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
FOXN3O00409 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
FOXN3O00409 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
FOXN3O00409 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
FOXN3O00409 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.45■□□□□ 0.06
FOXN3O00409 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.45■□□□□ 0.06
FOXN3O00409 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
FOXN3O00409 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.45■□□□□ 0.06
FOXN3O00409 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.45■□□□□ 0.06
FOXN3O00409 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 AC006122.1-201ENST00000493323 440 ntBASIC15.45■□□□□ 0.06
FOXN3O00409 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
FOXN3O00409 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.45■□□□□ 0.06
FOXN3O00409 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 AC010328.2-201ENST00000597698 1111 ntBASIC15.45■□□□□ 0.06
FOXN3O00409 AC017083.2-201ENST00000608069 979 ntBASIC15.45■□□□□ 0.06
FOXN3O00409 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.45■□□□□ 0.06
FOXN3O00409 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
FOXN3O00409 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.45■□□□□ 0.06
FOXN3O00409 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.45■□□□□ 0.06
FOXN3O00409 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
FOXN3O00409 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.45■□□□□ 0.06
FOXN3O00409 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.45■□□□□ 0.06
FOXN3O00409 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
FOXN3O00409 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FOXN3O00409 AC105206.1-202ENST00000314927 2368 ntBASIC15.44■□□□□ 0.06
FOXN3O00409 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.44■□□□□ 0.06
FOXN3O00409 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.44■□□□□ 0.06
FOXN3O00409 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXN3O00409 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FOXN3O00409 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FOXN3O00409 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms