Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB13Q9Y5F0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB13Q9Y5F0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PCDHB13Q9Y5F0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB13Q9Y5F0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB13Q9Y5F0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB13Q9Y5F0 AC006504.5-208ENST00000588784 2401 ntBASIC16.25■□□□□ 0.19
PCDHB13Q9Y5F0 SHC1P1-201ENST00000425230 1745 ntBASIC16.25■□□□□ 0.19
PCDHB13Q9Y5F0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB13Q9Y5F0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 AC007228.2-201ENST00000602145 1328 ntBASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 CFTRP3-201ENST00000376400 212 ntBASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 FAM21FP-201ENST00000426241 1131 ntBASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 AC010086.1-201ENST00000437359 1052 ntBASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 CICP12-201ENST00000455801 843 ntBASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 PQLC2L-206ENST00000468043 883 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 OR4A46P-201ENST00000527255 933 ntBASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 MIR4259-201ENST00000584466 101 ntBASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB13Q9Y5F0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 AL023775.1-201ENST00000454907 1746 ntBASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 AC079178.1-201ENST00000420915 656 ntBASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 AL513285.1-201ENST00000423187 432 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 AC009245.1-201ENST00000456481 862 ntBASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 RPL23AP68-201ENST00000480924 445 ntBASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 AC112206.4-201ENST00000515142 405 ntBASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 RNA5SP412-201ENST00000516234 123 ntBASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB13Q9Y5F0 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms