Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 NRADDP-201ENST00000437305 691 ntBASIC19.29■□□□□ 0.68
PHF8Q9UPP1 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 MT3-202ENST00000561640 514 ntTSL 3 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 AC126755.5-201ENST00000622756 267 ntBASIC19.29■□□□□ 0.68
PHF8Q9UPP1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PHF8Q9UPP1 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 GOLGA6L16P-201ENST00000441780 1299 ntBASIC19.28■□□□□ 0.68
PHF8Q9UPP1 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 AC023906.1-201ENST00000486386 453 ntBASIC19.28■□□□□ 0.68
PHF8Q9UPP1 EMC4-208ENST00000559078 599 ntTSL 3 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 AL049840.2-201ENST00000602722 535 ntBASIC19.28■□□□□ 0.68
PHF8Q9UPP1 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 ESR1-214ENST00000638569 132 ntTSL 5 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF8Q9UPP1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 AC011498.7-201ENST00000624986 2027 ntBASIC19.27■□□□□ 0.68
PHF8Q9UPP1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 NALT1-202ENST00000450304 437 ntTSL 3 BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 BCRP4-201ENST00000506079 804 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms