Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCM2LQ9NUG4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 DRD5P1-201ENST00000456605 1438 ntBASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 AC007969.1-201ENST00000433675 447 ntBASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 AC015936.2-201ENST00000593177 259 ntBASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 PRSS30P-206ENST00000641773 873 ntBASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 AC003102.2-201ENST00000589195 1469 ntBASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCM2LQ9NUG4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 BRWD1P1-201ENST00000401091 371 ntBASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 MIR1908-201ENST00000410394 80 ntBASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 NUS1P3-201ENST00000423502 862 ntBASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms