Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN18Q99952 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 SIRPB3P-201ENST00000340424 1216 ntBASIC16.22■□□□□ 0.19
PTPN18Q99952 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 SNORA57-201ENST00000383870 149 ntBASIC16.22■□□□□ 0.19
PTPN18Q99952 EEF1DP5-201ENST00000431410 772 ntBASIC16.22■□□□□ 0.19
PTPN18Q99952 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN18Q99952 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPN18Q99952 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC16.22■□□□□ 0.19
PTPN18Q99952 AL512310.5-201ENST00000551999 515 ntBASIC16.22■□□□□ 0.19
PTPN18Q99952 DUT-207ENST00000559416 635 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN18Q99952 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC16.22■□□□□ 0.19
PTPN18Q99952 AC079414.2-201ENST00000567157 1104 ntBASIC16.22■□□□□ 0.19
PTPN18Q99952 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC16.22■□□□□ 0.19
PTPN18Q99952 NEK4P3-201ENST00000604859 544 ntBASIC16.22■□□□□ 0.19
PTPN18Q99952 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN18Q99952 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN18Q99952 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PTPN18Q99952 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PTPN18Q99952 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTPN18Q99952 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PTPN18Q99952 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN18Q99952 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN18Q99952 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPN18Q99952 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN18Q99952 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PTPN18Q99952 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN18Q99952 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN18Q99952 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN18Q99952 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PTPN18Q99952 ABCD1P4-201ENST00000399687 604 ntBASIC16.21■□□□□ 0.19
PTPN18Q99952 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC16.21■□□□□ 0.19
PTPN18Q99952 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN18Q99952 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC16.21■□□□□ 0.19
PTPN18Q99952 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN18Q99952 RN7SL351P-201ENST00000469306 248 ntBASIC16.21■□□□□ 0.19
PTPN18Q99952 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN18Q99952 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN18Q99952 RN7SL605P-201ENST00000577229 281 ntBASIC16.21■□□□□ 0.19
PTPN18Q99952 PRMT1P1-201ENST00000604252 1009 ntBASIC16.21■□□□□ 0.19
PTPN18Q99952 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PTPN18Q99952 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN18Q99952 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN18Q99952 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN18Q99952 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
PTPN18Q99952 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN18Q99952 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PTPN18Q99952 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.21■□□□□ 0.18
PTPN18Q99952 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.21■□□□□ 0.18
PTPN18Q99952 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN18Q99952 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN18Q99952 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN18Q99952 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN18Q99952 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN18Q99952 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN18Q99952 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN18Q99952 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN18Q99952 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN18Q99952 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN18Q99952 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN18Q99952 PPT1-215ENST00000641471 2368 ntBASIC16.2■□□□□ 0.18
PTPN18Q99952 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PTPN18Q99952 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PTPN18Q99952 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN18Q99952 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN18Q99952 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PTPN18Q99952 SNX15-201ENST00000352068 771 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN18Q99952 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN18Q99952 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN18Q99952 ZNF877P-201ENST00000437614 612 ntBASIC16.2■□□□□ 0.18
PTPN18Q99952 GPX3-202ENST00000517973 612 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN18Q99952 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN18Q99952 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN18Q99952 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN18Q99952 AL049840.2-201ENST00000602722 535 ntBASIC16.2■□□□□ 0.18
PTPN18Q99952 AC080013.5-201ENST00000607044 679 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms