Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 AC020658.6-201ENST00000623564 1870 ntBASIC15.57■□□□□ 0.08
LRCH3Q96II8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 AP000354.1-201ENST00000396982 456 ntBASIC15.57■□□□□ 0.08
LRCH3Q96II8 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 AC079791.1-201ENST00000605356 973 ntBASIC15.57■□□□□ 0.08
LRCH3Q96II8 GGNBP1-204ENST00000613113 887 ntBASIC15.57■□□□□ 0.08
LRCH3Q96II8 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 AC015912.3-201ENST00000619432 348 ntBASIC15.57■□□□□ 0.08
LRCH3Q96II8 AC139713.2-207ENST00000641556 1292 ntBASIC15.57■□□□□ 0.08
LRCH3Q96II8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 FKBP4P8-201ENST00000610931 1369 ntBASIC15.57■□□□□ 0.08
LRCH3Q96II8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LRCH3Q96II8 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 AC007292.2-201ENST00000593524 1812 ntBASIC15.57■□□□□ 0.08
LRCH3Q96II8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH3Q96II8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 NQO2-204ENST00000380454 851 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 AC006328.1-201ENST00000437571 379 ntBASIC15.56■□□□□ 0.08
LRCH3Q96II8 ASS1P2-201ENST00000439895 1223 ntBASIC15.56■□□□□ 0.08
LRCH3Q96II8 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 RN7SL277P-201ENST00000481521 288 ntBASIC15.56■□□□□ 0.08
LRCH3Q96II8 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 F11R-204ENST00000537746 1245 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 AC120498.7-201ENST00000562876 330 ntBASIC15.56■□□□□ 0.08
LRCH3Q96II8 ANKRD26P1-203ENST00000569528 966 ntBASIC15.56■□□□□ 0.08
LRCH3Q96II8 ACTBP9-201ENST00000587663 1099 ntBASIC15.56■□□□□ 0.08
LRCH3Q96II8 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 CSTP2-201ENST00000610599 398 ntBASIC15.56■□□□□ 0.08
LRCH3Q96II8 AL391262.2-201ENST00000622466 494 ntBASIC15.56■□□□□ 0.08
LRCH3Q96II8 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 AC005865.2-202ENST00000635814 725 ntBASIC15.56■□□□□ 0.08
LRCH3Q96II8 AL008638.4-201ENST00000624792 1315 ntBASIC15.56■□□□□ 0.08
LRCH3Q96II8 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms