Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 AC004832.2-201ENST00000426397 482 ntBASIC12.79□□□□□ -0.36
AP3S1Q92572 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.79□□□□□ -0.36
AP3S1Q92572 UNC93B7-201ENST00000509439 705 ntBASIC12.79□□□□□ -0.36
AP3S1Q92572 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
AP3S1Q92572 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.79□□□□□ -0.36
AP3S1Q92572 AL662844.1-201ENST00000546340 181 ntBASIC12.79□□□□□ -0.36
AP3S1Q92572 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 AC145285.3-201ENST00000564603 959 ntBASIC12.79□□□□□ -0.36
AP3S1Q92572 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.79□□□□□ -0.36
AP3S1Q92572 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.79□□□□□ -0.36
AP3S1Q92572 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 AL603764.1-201ENST00000636452 321 ntBASIC12.79□□□□□ -0.36
AP3S1Q92572 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.79□□□□□ -0.36
AP3S1Q92572 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 AC064801.2-201ENST00000625052 1303 ntBASIC12.79□□□□□ -0.36
AP3S1Q92572 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
AP3S1Q92572 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 VENTXP1-201ENST00000569334 2716 ntBASIC12.79□□□□□ -0.36
AP3S1Q92572 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.79□□□□□ -0.36
AP3S1Q92572 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 CETN4P-206ENST00000642099 2168 ntBASIC12.79□□□□□ -0.36
AP3S1Q92572 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S1Q92572 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S1Q92572 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S1Q92572 AL445250.1-201ENST00000641671 2259 ntBASIC12.78□□□□□ -0.36
AP3S1Q92572 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.78□□□□□ -0.36
AP3S1Q92572 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.78□□□□□ -0.36
AP3S1Q92572 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S1Q92572 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S1Q92572 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.78□□□□□ -0.36
AP3S1Q92572 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AP3S1Q92572 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.78□□□□□ -0.36
AP3S1Q92572 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 ACTG1P14-201ENST00000446382 1122 ntBASIC12.78□□□□□ -0.36
AP3S1Q92572 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.78□□□□□ -0.36
AP3S1Q92572 RNA5SP416-201ENST00000516838 111 ntBASIC12.78□□□□□ -0.36
AP3S1Q92572 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S1Q92572 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AP3S1Q92572 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.78□□□□□ -0.36
AP3S1Q92572 AC103988.2-201ENST00000561804 725 ntBASIC12.78□□□□□ -0.36
AP3S1Q92572 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.78□□□□□ -0.36
AP3S1Q92572 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.78□□□□□ -0.36
AP3S1Q92572 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S1Q92572 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.78□□□□□ -0.36
AP3S1Q92572 AL589739.1-201ENST00000607720 493 ntBASIC12.78□□□□□ -0.36
AP3S1Q92572 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.78□□□□□ -0.36
AP3S1Q92572 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.78□□□□□ -0.36
AP3S1Q92572 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
AP3S1Q92572 AC092865.6-201ENST00000642101 219 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms