Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 AC007274.2-201ENST00000421675 662 ntBASIC13.74□□□□□ -0.21
TM9SF4Q92544 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 AC012441.2-201ENST00000444843 739 ntBASIC13.74□□□□□ -0.21
TM9SF4Q92544 FTLP1-201ENST00000449155 526 ntBASIC13.74□□□□□ -0.21
TM9SF4Q92544 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 CHMP4BP1-201ENST00000556017 588 ntBASIC13.74□□□□□ -0.21
TM9SF4Q92544 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 DUX4L46-201ENST00000566845 751 ntBASIC13.74□□□□□ -0.21
TM9SF4Q92544 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 AC097724.1-201ENST00000609581 426 ntBASIC13.74□□□□□ -0.21
TM9SF4Q92544 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 AL157791.1-201ENST00000553667 1699 ntBASIC13.74□□□□□ -0.21
TM9SF4Q92544 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 REXO1L4P-201ENST00000605109 1937 ntBASIC13.73□□□□□ -0.21
TM9SF4Q92544 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.73□□□□□ -0.21
TM9SF4Q92544 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 PUDPP3-201ENST00000445368 636 ntBASIC13.73□□□□□ -0.21
TM9SF4Q92544 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 AC125604.1-201ENST00000496255 707 ntBASIC13.73□□□□□ -0.21
TM9SF4Q92544 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 FGFR3P5-201ENST00000564496 886 ntBASIC13.73□□□□□ -0.21
TM9SF4Q92544 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 AC005324.6-201ENST00000587972 613 ntBASIC13.73□□□□□ -0.21
TM9SF4Q92544 AC138696.2-201ENST00000607376 223 ntBASIC13.73□□□□□ -0.21
TM9SF4Q92544 AL358472.3-201ENST00000608147 415 ntBASIC13.73□□□□□ -0.21
TM9SF4Q92544 AC090164.2-201ENST00000611487 516 ntBASIC13.73□□□□□ -0.21
TM9SF4Q92544 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms