Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.03■□□□□ -0
ATG4AQ8WYN0 RN7SL752P-201ENST00000463779 287 ntBASIC15.03■□□□□ -0
ATG4AQ8WYN0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.03■□□□□ -0
ATG4AQ8WYN0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
ATG4AQ8WYN0 SLC25A47P1-201ENST00000531577 414 ntBASIC15.03■□□□□ -0
ATG4AQ8WYN0 AC078819.1-201ENST00000547454 765 ntBASIC15.03■□□□□ -0
ATG4AQ8WYN0 AC012085.1-201ENST00000548270 765 ntBASIC15.03■□□□□ -0
ATG4AQ8WYN0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.03■□□□□ -0
ATG4AQ8WYN0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.03■□□□□ -0
ATG4AQ8WYN0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.03■□□□□ -0
ATG4AQ8WYN0 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.03■□□□□ -0
ATG4AQ8WYN0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ATG4AQ8WYN0 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.03■□□□□ -0
ATG4AQ8WYN0 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
ATG4AQ8WYN0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ATG4AQ8WYN0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
ATG4AQ8WYN0 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.03■□□□□ -0
ATG4AQ8WYN0 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.03■□□□□ -0
ATG4AQ8WYN0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.03■□□□□ -0
ATG4AQ8WYN0 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC15.03■□□□□ -0
ATG4AQ8WYN0 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.03■□□□□ -0
ATG4AQ8WYN0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ATG4AQ8WYN0 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.03■□□□□ -0
ATG4AQ8WYN0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.03■□□□□ -0
ATG4AQ8WYN0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.03■□□□□ -0
ATG4AQ8WYN0 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
ATG4AQ8WYN0 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ATG4AQ8WYN0 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ATG4AQ8WYN0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ATG4AQ8WYN0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ATG4AQ8WYN0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ATG4AQ8WYN0 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ATG4AQ8WYN0 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ATG4AQ8WYN0 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ATG4AQ8WYN0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.02■□□□□ -0
ATG4AQ8WYN0 AC019294.4-201ENST00000561777 2905 ntBASIC15.02■□□□□ -0
ATG4AQ8WYN0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ATG4AQ8WYN0 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.02■□□□□ -0
ATG4AQ8WYN0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 C2orf27AP3-201ENST00000434123 579 ntBASIC15.02■□□□□ -0
ATG4AQ8WYN0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 FTH1P14-201ENST00000482930 551 ntBASIC15.02■□□□□ -0
ATG4AQ8WYN0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.02■□□□□ -0
ATG4AQ8WYN0 AL354718.3-201ENST00000616414 581 ntBASIC15.02■□□□□ -0
ATG4AQ8WYN0 AC138951.2-201ENST00000623455 1161 ntBASIC15.02■□□□□ -0
ATG4AQ8WYN0 CR382287.1-201ENST00000623954 586 ntBASIC15.02■□□□□ -0
ATG4AQ8WYN0 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 AL354989.2-201ENST00000435838 1540 ntBASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.02□□□□□ -0.01
ATG4AQ8WYN0 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms