Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 AC004945.1-201ENST00000416738 983 ntBASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 FAM8A4P-201ENST00000435433 1213 ntBASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 AC244669.2-201ENST00000612320 853 ntBASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLHC1Q8NHS4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.96□□□□□ -0.18
CLHC1Q8NHS4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 C2orf27AP3-201ENST00000434123 579 ntBASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 TMEM198B-204ENST00000484016 896 ntBASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 AC011495.1-201ENST00000498085 584 ntBASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 ALG3P1-201ENST00000508806 1114 ntBASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 SLC25A47P1-201ENST00000531577 414 ntBASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 AL354718.3-201ENST00000616414 581 ntBASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 CR382287.1-201ENST00000623954 586 ntBASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 MIR497HG-202ENST00000572453 3838 ntBASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLHC1Q8NHS4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 TUBB8P4-201ENST00000511806 1324 ntBASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 AC005229.1-201ENST00000392885 409 ntBASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 AC092933.1-201ENST00000393644 945 ntBASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLHC1Q8NHS4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms