Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.4■□□□□ 0.06
RNF135Q8IUD6 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF135Q8IUD6 INE2-201ENST00000630399 1874 ntBASIC15.4■□□□□ 0.06
RNF135Q8IUD6 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 WASH3P-207ENST00000560956 1394 ntBASIC15.39■□□□□ 0.05
RNF135Q8IUD6 AJ011931.1-201ENST00000618749 2492 ntBASIC15.39■□□□□ 0.05
RNF135Q8IUD6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 ACE3P-201ENST00000423435 1973 ntBASIC15.39■□□□□ 0.05
RNF135Q8IUD6 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 NDUFS6P1-201ENST00000485187 316 ntBASIC15.39■□□□□ 0.05
RNF135Q8IUD6 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 AC026410.1-201ENST00000507366 1101 ntBASIC15.39■□□□□ 0.05
RNF135Q8IUD6 FAM86KP-201ENST00000509817 987 ntBASIC15.39■□□□□ 0.05
RNF135Q8IUD6 TMCO5B-205ENST00000530020 894 ntBASIC15.39■□□□□ 0.05
RNF135Q8IUD6 AC093752.3-201ENST00000567343 901 ntBASIC15.39■□□□□ 0.05
RNF135Q8IUD6 PHBP15-201ENST00000574228 665 ntBASIC15.39■□□□□ 0.05
RNF135Q8IUD6 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 AC011247.3-201ENST00000603297 438 ntBASIC15.39■□□□□ 0.05
RNF135Q8IUD6 AC005618.3-201ENST00000624928 458 ntBASIC15.39■□□□□ 0.05
RNF135Q8IUD6 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 INTS4P1-203ENST00000641008 3683 ntBASIC15.39■□□□□ 0.05
RNF135Q8IUD6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 ZBED1P1-201ENST00000502364 1930 ntBASIC15.39■□□□□ 0.05
RNF135Q8IUD6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF135Q8IUD6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 AC090502.4-201ENST00000551714 1386 ntBASIC15.38■□□□□ 0.05
RNF135Q8IUD6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 HIST2H2BA-201ENST00000412169 381 ntBASIC15.38■□□□□ 0.05
RNF135Q8IUD6 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 BCAS2P2-201ENST00000425064 674 ntBASIC15.38■□□□□ 0.05
RNF135Q8IUD6 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 AL118516.1-201ENST00000564152 670 ntBASIC15.38■□□□□ 0.05
RNF135Q8IUD6 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms