Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 MBLAC2-202ENST00000514906 1936 ntBASIC15.1■□□□□ 0.01
RFX6Q8HWS3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 CNN2P10-201ENST00000443067 918 ntBASIC15.1■□□□□ 0.01
RFX6Q8HWS3 CHMP1AP1-201ENST00000445563 662 ntBASIC15.1■□□□□ 0.01
RFX6Q8HWS3 HIST2H2BB-201ENST00000449108 381 ntBASIC15.1■□□□□ 0.01
RFX6Q8HWS3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 C2orf69P2-201ENST00000562032 1123 ntBASIC15.1■□□□□ 0.01
RFX6Q8HWS3 AP006547.1-201ENST00000563435 692 ntBASIC15.1■□□□□ 0.01
RFX6Q8HWS3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFX6Q8HWS3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 AC010141.1-201ENST00000411585 623 ntBASIC15.09■□□□□ 0.01
RFX6Q8HWS3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.09■□□□□ 0.01
RFX6Q8HWS3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 RPL7P3-201ENST00000441388 714 ntBASIC15.09■□□□□ 0.01
RFX6Q8HWS3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 HOMER2P2-201ENST00000451621 847 ntBASIC15.09■□□□□ 0.01
RFX6Q8HWS3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms