Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 AP000356.3-201ENST00000382243 753 ntBASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 NOC2LP1-201ENST00000450578 752 ntBASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 DUX4L50-201ENST00000455245 715 ntBASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 LY6E-208ENST00000520531 490 ntTSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 SPCS2P2-201ENST00000603270 608 ntBASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 AL022334.2-201ENST00000610000 484 ntBASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 AC103691.2-201ENST00000618824 433 ntBASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 AC092053.3-201ENST00000641308 4975 ntBASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 MYADML-201ENST00000474610 2147 ntBASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BRD3OSQ6XYD6 ST20-AS1-201ENST00000560255 4223 ntBASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 AP002353.1-201ENST00000528257 1599 ntBASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BRD3OSQ6XYD6 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms