Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC008536.3-201ENST00000623282 1599 ntBASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 TKT-201ENST00000296289 1931 ntTSL 5 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 RNLS-203ENST00000437752 525 ntTSL 2 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 RN7SL684P-201ENST00000465665 294 ntBASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 SRP14-208ENST00000560773 468 ntTSL 3 BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPAQ5VT25 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 VENTXP4-201ENST00000449029 958 ntBASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 PSME2P2-201ENST00000453033 700 ntBASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 TREX1-203ENST00000456089 629 ntTSL 3 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 AC023906.1-201ENST00000486386 453 ntBASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 AL513477.1-201ENST00000602865 2407 ntBASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPAQ5VT25 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 AC007279.1-201ENST00000448547 837 ntBASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 AC245369.7-201ENST00000631386 350 ntBASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 BRI3P1-201ENST00000440440 378 ntBASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 HNRNPA1P10-201ENST00000444945 962 ntBASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 AC004801.1-201ENST00000549557 360 ntBASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 AC091304.3-201ENST00000566500 716 ntBASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms