Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ACTBP11-201ENST00000436287 1126 ntBASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 AC044849.1-201ENST00000519737 1188 ntBASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 AC126915.1-201ENST00000522847 1038 ntBASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 NKAIN1P1-201ENST00000435754 582 ntBASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 AC009779.1-201ENST00000551138 283 ntBASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 AL591471.1-201ENST00000621855 229 ntBASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 AP002353.1-201ENST00000528257 1599 ntBASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PTPN20Q4JDL3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 BEND3P1-201ENST00000421591 1944 ntBASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms