Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CERKLQ49MI3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CERKLQ49MI3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.8■□□□□ 0.28
CERKLQ49MI3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CERKLQ49MI3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CERKLQ49MI3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CERKLQ49MI3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CERKLQ49MI3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.8■□□□□ 0.28
CERKLQ49MI3 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CERKLQ49MI3 AC006372.4-201ENST00000624122 1543 ntBASIC16.8■□□□□ 0.28
CERKLQ49MI3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CERKLQ49MI3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CERKLQ49MI3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CERKLQ49MI3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CERKLQ49MI3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CERKLQ49MI3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 ERP29P1-201ENST00000442902 706 ntBASIC16.79■□□□□ 0.28
CERKLQ49MI3 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 NDUFB10P1-201ENST00000567319 521 ntBASIC16.79■□□□□ 0.28
CERKLQ49MI3 NUDT4P2-201ENST00000578341 546 ntBASIC16.79■□□□□ 0.28
CERKLQ49MI3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 AL021707.6-201ENST00000609212 491 ntBASIC16.79■□□□□ 0.28
CERKLQ49MI3 AC009145.4-201ENST00000625119 1294 ntBASIC16.79■□□□□ 0.28
CERKLQ49MI3 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 CICP24-201ENST00000605464 2705 ntBASIC16.79■□□□□ 0.28
CERKLQ49MI3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 AC232323.1-201ENST00000540724 2099 ntBASIC16.79■□□□□ 0.28
CERKLQ49MI3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CERKLQ49MI3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CERKLQ49MI3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CERKLQ49MI3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CERKLQ49MI3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CERKLQ49MI3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CERKLQ49MI3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CERKLQ49MI3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CERKLQ49MI3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CERKLQ49MI3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CERKLQ49MI3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CERKLQ49MI3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CERKLQ49MI3 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CERKLQ49MI3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CERKLQ49MI3 GUSBP10-201ENST00000417412 665 ntBASIC16.78■□□□□ 0.28
CERKLQ49MI3 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CERKLQ49MI3 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 AL354861.1-201ENST00000445213 355 ntBASIC16.78■□□□□ 0.28
CERKLQ49MI3 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.78■□□□□ 0.28
CERKLQ49MI3 TMCO5B-205ENST00000530020 894 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms