Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COL16A1Q07092 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
COL16A1Q07092 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.61■□□□□ 0.57
COL16A1Q07092 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COL16A1Q07092 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.61■□□□□ 0.57
COL16A1Q07092 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
COL16A1Q07092 IL6RP1-201ENST00000417848 1273 ntBASIC18.61■□□□□ 0.57
COL16A1Q07092 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 AC105443.1-201ENST00000433754 712 ntBASIC18.61■□□□□ 0.57
COL16A1Q07092 PLAC9P1-203ENST00000440031 223 ntBASIC18.61■□□□□ 0.57
COL16A1Q07092 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC18.61■□□□□ 0.57
COL16A1Q07092 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC18.61■□□□□ 0.57
COL16A1Q07092 PDPN-208ENST00000509009 571 ntTSL 4 BASIC18.61■□□□□ 0.57
COL16A1Q07092 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC18.61■□□□□ 0.57
COL16A1Q07092 RPL30-213ENST00000523172 274 ntTSL 5 BASIC18.61■□□□□ 0.57
COL16A1Q07092 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
COL16A1Q07092 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC18.61■□□□□ 0.57
COL16A1Q07092 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC18.61■□□□□ 0.57
COL16A1Q07092 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC18.61■□□□□ 0.57
COL16A1Q07092 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC18.61■□□□□ 0.57
COL16A1Q07092 AC124944.3-201ENST00000607976 1304 ntBASIC18.61■□□□□ 0.57
COL16A1Q07092 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC18.61■□□□□ 0.57
COL16A1Q07092 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COL16A1Q07092 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.61■□□□□ 0.57
COL16A1Q07092 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.61■□□□□ 0.57
COL16A1Q07092 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC18.61■□□□□ 0.57
COL16A1Q07092 AC018442.1-201ENST00000421439 2061 ntBASIC18.61■□□□□ 0.57
COL16A1Q07092 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.61■□□□□ 0.57
COL16A1Q07092 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.61■□□□□ 0.57
COL16A1Q07092 AC020763.4-201ENST00000623414 4170 ntBASIC18.61■□□□□ 0.57
COL16A1Q07092 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
COL16A1Q07092 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL16A1Q07092 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL16A1Q07092 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC18.6■□□□□ 0.57
COL16A1Q07092 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL16A1Q07092 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL16A1Q07092 AC106872.9-201ENST00000512437 1393 ntBASIC18.6■□□□□ 0.57
COL16A1Q07092 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
COL16A1Q07092 TPM3P7-201ENST00000338274 732 ntBASIC18.6■□□□□ 0.57
COL16A1Q07092 AL391903.1-201ENST00000407513 365 ntBASIC18.6■□□□□ 0.57
COL16A1Q07092 CHCHD2P6-201ENST00000454346 447 ntBASIC18.6■□□□□ 0.57
COL16A1Q07092 RN7SL76P-201ENST00000482435 289 ntBASIC18.6■□□□□ 0.57
COL16A1Q07092 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC18.6■□□□□ 0.57
COL16A1Q07092 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC18.6■□□□□ 0.57
COL16A1Q07092 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC18.6■□□□□ 0.57
COL16A1Q07092 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC18.6■□□□□ 0.57
COL16A1Q07092 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL16A1Q07092 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC18.6■□□□□ 0.57
COL16A1Q07092 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COL16A1Q07092 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL16A1Q07092 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.6■□□□□ 0.57
COL16A1Q07092 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
COL16A1Q07092 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL16A1Q07092 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL16A1Q07092 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
COL16A1Q07092 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL16A1Q07092 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC18.6■□□□□ 0.57
COL16A1Q07092 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
COL16A1Q07092 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC18.6■□□□□ 0.57
COL16A1Q07092 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL16A1Q07092 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.6■□□□□ 0.57
COL16A1Q07092 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.6■□□□□ 0.57
COL16A1Q07092 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL16A1Q07092 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC18.6■□□□□ 0.57
COL16A1Q07092 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL16A1Q07092 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL16A1Q07092 FAM213AP2-201ENST00000521579 683 ntBASIC18.6■□□□□ 0.57
COL16A1Q07092 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL16A1Q07092 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.59■□□□□ 0.57
COL16A1Q07092 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.59■□□□□ 0.57
COL16A1Q07092 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.59■□□□□ 0.57
COL16A1Q07092 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms