Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.72□□□□□ -0.21
GABREP78334 RN7SL396P-201ENST00000471086 295 ntBASIC13.72□□□□□ -0.21
GABREP78334 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC13.72□□□□□ -0.21
GABREP78334 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC13.72□□□□□ -0.21
GABREP78334 RN7SL596P-201ENST00000582123 288 ntBASIC13.72□□□□□ -0.21
GABREP78334 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.72□□□□□ -0.21
GABREP78334 MIR2392-201ENST00000584881 84 ntBASIC13.72□□□□□ -0.21
GABREP78334 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.72□□□□□ -0.21
GABREP78334 HKR1-225ENST00000592168 566 ntTSL 4 BASIC13.72□□□□□ -0.21
GABREP78334 SIGLEC22P-201ENST00000599104 714 ntBASIC13.72□□□□□ -0.21
GABREP78334 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.72□□□□□ -0.21
GABREP78334 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
GABREP78334 AC011471.3-201ENST00000623576 402 ntBASIC13.72□□□□□ -0.21
GABREP78334 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GABREP78334 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABREP78334 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABREP78334 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABREP78334 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABREP78334 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABREP78334 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
GABREP78334 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.72□□□□□ -0.21
GABREP78334 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GABREP78334 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.72□□□□□ -0.21
GABREP78334 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.72□□□□□ -0.21
GABREP78334 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABREP78334 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
GABREP78334 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABREP78334 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GABREP78334 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABREP78334 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.72□□□□□ -0.21
GABREP78334 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GABREP78334 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.71□□□□□ -0.21
GABREP78334 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
GABREP78334 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
GABREP78334 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.71□□□□□ -0.21
GABREP78334 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.71□□□□□ -0.21
GABREP78334 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.71□□□□□ -0.21
GABREP78334 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC13.71□□□□□ -0.21
GABREP78334 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.71□□□□□ -0.21
GABREP78334 FAU-202ENST00000434372 533 ntTSL 2 BASIC13.71□□□□□ -0.21
GABREP78334 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.71□□□□□ -0.21
GABREP78334 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.71□□□□□ -0.21
GABREP78334 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
GABREP78334 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
GABREP78334 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
GABREP78334 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.71□□□□□ -0.21
GABREP78334 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC13.71□□□□□ -0.21
GABREP78334 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.71□□□□□ -0.21
GABREP78334 RN7SL357P-201ENST00000581065 298 ntBASIC13.71□□□□□ -0.21
GABREP78334 AC140113.1-201ENST00000603467 169 ntBASIC13.71□□□□□ -0.21
GABREP78334 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.71□□□□□ -0.21
GABREP78334 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.71□□□□□ -0.21
GABREP78334 LINC01101-201ENST00000622953 1884 ntBASIC13.71□□□□□ -0.21
GABREP78334 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABREP78334 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.71□□□□□ -0.21
GABREP78334 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.71□□□□□ -0.21
GABREP78334 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GABREP78334 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
GABREP78334 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.71□□□□□ -0.22
GABREP78334 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GABREP78334 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GABREP78334 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.71□□□□□ -0.22
GABREP78334 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GABREP78334 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
GABREP78334 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.71□□□□□ -0.22
GABREP78334 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GABREP78334 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GABREP78334 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
GABREP78334 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
GABREP78334 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GABREP78334 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.71□□□□□ -0.22
GABREP78334 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GABREP78334 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GABREP78334 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
GABREP78334 AP002353.1-201ENST00000528257 1599 ntBASIC13.71□□□□□ -0.22
GABREP78334 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.71□□□□□ -0.22
GABREP78334 FAM90A21P-201ENST00000510875 1396 ntBASIC13.71□□□□□ -0.22
GABREP78334 FAM90A15P-201ENST00000514465 1395 ntBASIC13.71□□□□□ -0.22
GABREP78334 FAM90A6P-201ENST00000515148 1394 ntBASIC13.71□□□□□ -0.22
GABREP78334 FAM90A16P-201ENST00000526662 1395 ntBASIC13.71□□□□□ -0.22
GABREP78334 FAM90A9P-201ENST00000527940 1395 ntBASIC13.71□□□□□ -0.22
GABREP78334 FAM90A5P-201ENST00000528738 1395 ntBASIC13.71□□□□□ -0.22
GABREP78334 FAM90A14P-201ENST00000530386 1395 ntBASIC13.71□□□□□ -0.22
GABREP78334 FAM90A13P-201ENST00000534703 1395 ntBASIC13.71□□□□□ -0.22
GABREP78334 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GABREP78334 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 218 ms