Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP46P62068 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USP46P62068 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.27■□□□□ 0.04
USP46P62068 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.27■□□□□ 0.04
USP46P62068 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP46P62068 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP46P62068 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.27■□□□□ 0.04
USP46P62068 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
USP46P62068 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USP46P62068 AC091046.1-201ENST00000331871 207 ntBASIC15.27■□□□□ 0.04
USP46P62068 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC15.27■□□□□ 0.04
USP46P62068 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP46P62068 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.27■□□□□ 0.04
USP46P62068 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.27■□□□□ 0.04
USP46P62068 AC134698.3-201ENST00000523880 214 ntBASIC15.27■□□□□ 0.04
USP46P62068 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.27■□□□□ 0.04
USP46P62068 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.27■□□□□ 0.04
USP46P62068 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.27■□□□□ 0.04
USP46P62068 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.27■□□□□ 0.04
USP46P62068 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.27■□□□□ 0.04
USP46P62068 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP46P62068 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.27■□□□□ 0.04
USP46P62068 AC079791.1-201ENST00000605356 973 ntBASIC15.27■□□□□ 0.04
USP46P62068 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
USP46P62068 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
USP46P62068 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP46P62068 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.27■□□□□ 0.03
USP46P62068 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
USP46P62068 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP46P62068 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.27■□□□□ 0.03
USP46P62068 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP46P62068 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.27■□□□□ 0.03
USP46P62068 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP46P62068 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.27■□□□□ 0.03
USP46P62068 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
USP46P62068 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.27■□□□□ 0.03
USP46P62068 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
USP46P62068 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP46P62068 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.27■□□□□ 0.03
USP46P62068 AC215219.1-201ENST00000400706 1817 ntBASIC15.27■□□□□ 0.03
USP46P62068 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.27■□□□□ 0.03
USP46P62068 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
USP46P62068 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
USP46P62068 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
USP46P62068 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 LINC01165-201ENST00000445190 1623 ntBASIC15.26■□□□□ 0.03
USP46P62068 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
USP46P62068 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 AC239868.1-201ENST00000369385 493 ntBASIC15.26■□□□□ 0.03
USP46P62068 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.26■□□□□ 0.03
USP46P62068 ST13P19-201ENST00000442505 1124 ntBASIC15.26■□□□□ 0.03
USP46P62068 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 AC116345.2-201ENST00000512837 523 ntBASIC15.26■□□□□ 0.03
USP46P62068 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.26■□□□□ 0.03
USP46P62068 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.26■□□□□ 0.03
USP46P62068 PGAM1P5-201ENST00000548011 764 ntBASIC15.26■□□□□ 0.03
USP46P62068 AC027237.1-201ENST00000560942 655 ntBASIC15.26■□□□□ 0.03
USP46P62068 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.26■□□□□ 0.03
USP46P62068 AL133499.1-201ENST00000596207 608 ntBASIC15.26■□□□□ 0.03
USP46P62068 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 AC079336.7-201ENST00000623428 1078 ntBASIC15.26■□□□□ 0.03
USP46P62068 AC015967.2-201ENST00000624092 234 ntBASIC15.26■□□□□ 0.03
USP46P62068 AC006435.4-201ENST00000625037 234 ntBASIC15.26■□□□□ 0.03
USP46P62068 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.26■□□□□ 0.03
USP46P62068 AL356737.1-201ENST00000634391 234 ntBASIC15.26■□□□□ 0.03
USP46P62068 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.26■□□□□ 0.03
USP46P62068 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 KRT8P19-201ENST00000551916 1455 ntBASIC15.26■□□□□ 0.03
USP46P62068 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.26■□□□□ 0.03
USP46P62068 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.26■□□□□ 0.03
USP46P62068 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP46P62068 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP46P62068 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms