Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHBDL3P58872 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
RHBDL3P58872 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RHBDL3P58872 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RHBDL3P58872 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.84■□□□□ 0.29
RHBDL3P58872 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.84■□□□□ 0.29
RHBDL3P58872 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RHBDL3P58872 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.84■□□□□ 0.29
RHBDL3P58872 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RHBDL3P58872 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.84■□□□□ 0.29
RHBDL3P58872 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 USP17L6P-201ENST00000382470 1197 ntBASIC16.84■□□□□ 0.29
RHBDL3P58872 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.84■□□□□ 0.29
RHBDL3P58872 AC097065.1-201ENST00000425737 517 ntBASIC16.84■□□□□ 0.29
RHBDL3P58872 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.84■□□□□ 0.29
RHBDL3P58872 RPL35P9-201ENST00000446059 350 ntBASIC16.84■□□□□ 0.29
RHBDL3P58872 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.84■□□□□ 0.29
RHBDL3P58872 RN7SL767P-201ENST00000493013 295 ntBASIC16.84■□□□□ 0.29
RHBDL3P58872 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RHBDL3P58872 AC093826.1-201ENST00000508655 993 ntBASIC16.84■□□□□ 0.29
RHBDL3P58872 ALG1L6P-201ENST00000515248 758 ntBASIC16.84■□□□□ 0.29
RHBDL3P58872 RNA5SP406-201ENST00000516106 112 ntBASIC16.84■□□□□ 0.29
RHBDL3P58872 SNORD3B-1-201ENST00000577988 758 ntBASIC16.84■□□□□ 0.29
RHBDL3P58872 MIR5196-201ENST00000578146 115 ntBASIC16.84■□□□□ 0.29
RHBDL3P58872 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.84■□□□□ 0.29
RHBDL3P58872 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.84■□□□□ 0.29
RHBDL3P58872 AC138466.5-201ENST00000624002 808 ntBASIC16.84■□□□□ 0.29
RHBDL3P58872 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
RHBDL3P58872 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.84■□□□□ 0.29
RHBDL3P58872 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RHBDL3P58872 AC020910.6-201ENST00000623084 1459 ntBASIC16.84■□□□□ 0.29
RHBDL3P58872 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.84■□□□□ 0.29
RHBDL3P58872 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.84■□□□□ 0.29
RHBDL3P58872 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RHBDL3P58872 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDL3P58872 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.83■□□□□ 0.29
RHBDL3P58872 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
RHBDL3P58872 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RHBDL3P58872 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.83■□□□□ 0.29
RHBDL3P58872 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHBDL3P58872 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHBDL3P58872 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHBDL3P58872 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHBDL3P58872 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHBDL3P58872 HMGA1P1-201ENST00000415560 1062 ntBASIC16.83■□□□□ 0.28
RHBDL3P58872 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RHBDL3P58872 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHBDL3P58872 AC092573.1-201ENST00000433054 884 ntBASIC16.83■□□□□ 0.28
RHBDL3P58872 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.83■□□□□ 0.28
RHBDL3P58872 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.83■□□□□ 0.28
RHBDL3P58872 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHBDL3P58872 GRPEL2P1-201ENST00000453145 339 ntBASIC16.83■□□□□ 0.28
RHBDL3P58872 AC026410.1-201ENST00000507366 1101 ntBASIC16.83■□□□□ 0.28
RHBDL3P58872 TUBB8P4-201ENST00000511806 1324 ntBASIC16.83■□□□□ 0.28
RHBDL3P58872 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RHBDL3P58872 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.83■□□□□ 0.28
RHBDL3P58872 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHBDL3P58872 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RHBDL3P58872 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.83■□□□□ 0.28
RHBDL3P58872 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.83■□□□□ 0.28
RHBDL3P58872 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.83■□□□□ 0.28
RHBDL3P58872 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.83■□□□□ 0.28
RHBDL3P58872 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHBDL3P58872 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.83■□□□□ 0.28
RHBDL3P58872 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHBDL3P58872 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.83■□□□□ 0.28
RHBDL3P58872 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RHBDL3P58872 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RHBDL3P58872 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHBDL3P58872 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.83■□□□□ 0.28
RHBDL3P58872 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RHBDL3P58872 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RHBDL3P58872 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.83■□□□□ 0.28
RHBDL3P58872 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RHBDL3P58872 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.82■□□□□ 0.28
RHBDL3P58872 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
RHBDL3P58872 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RHBDL3P58872 TBC1D27-202ENST00000424239 1573 ntBASIC16.82■□□□□ 0.28
RHBDL3P58872 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
RHBDL3P58872 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RHBDL3P58872 AC138761.6-201ENST00000583997 1423 ntBASIC16.82■□□□□ 0.28
RHBDL3P58872 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RHBDL3P58872 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RHBDL3P58872 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms