Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
LIMK2P53671 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.63□□□□□ -0.07
LIMK2P53671 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
LIMK2P53671 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LIMK2P53671 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LIMK2P53671 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.63□□□□□ -0.07
LIMK2P53671 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LIMK2P53671 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LIMK2P53671 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.63□□□□□ -0.07
LIMK2P53671 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.63□□□□□ -0.07
LIMK2P53671 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 FAM8A4P-201ENST00000435433 1213 ntBASIC14.63□□□□□ -0.07
LIMK2P53671 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.63□□□□□ -0.07
LIMK2P53671 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.63□□□□□ -0.07
LIMK2P53671 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.63□□□□□ -0.07
LIMK2P53671 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
LIMK2P53671 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LIMK2P53671 AC104982.3-201ENST00000581995 514 ntBASIC14.63□□□□□ -0.07
LIMK2P53671 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
LIMK2P53671 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.63□□□□□ -0.07
LIMK2P53671 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.63□□□□□ -0.07
LIMK2P53671 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.63□□□□□ -0.07
LIMK2P53671 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.63□□□□□ -0.07
LIMK2P53671 AC064801.2-201ENST00000625052 1303 ntBASIC14.63□□□□□ -0.07
LIMK2P53671 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
LIMK2P53671 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK2P53671 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.62□□□□□ -0.07
LIMK2P53671 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LIMK2P53671 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LIMK2P53671 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
LIMK2P53671 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.62□□□□□ -0.07
LIMK2P53671 KRT8P28-201ENST00000433288 1390 ntBASIC14.62□□□□□ -0.07
LIMK2P53671 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
LIMK2P53671 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LIMK2P53671 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.62□□□□□ -0.07
LIMK2P53671 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.62□□□□□ -0.07
LIMK2P53671 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.62□□□□□ -0.07
LIMK2P53671 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.62□□□□□ -0.07
LIMK2P53671 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.62□□□□□ -0.07
LIMK2P53671 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.62□□□□□ -0.07
LIMK2P53671 AC106820.3-201ENST00000561653 397 ntBASIC14.62□□□□□ -0.07
LIMK2P53671 AP006547.1-201ENST00000563435 692 ntBASIC14.62□□□□□ -0.07
LIMK2P53671 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.62□□□□□ -0.07
LIMK2P53671 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LIMK2P53671 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.62□□□□□ -0.07
LIMK2P53671 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.62□□□□□ -0.07
LIMK2P53671 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.62□□□□□ -0.07
LIMK2P53671 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LIMK2P53671 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.62□□□□□ -0.07
LIMK2P53671 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.62□□□□□ -0.07
LIMK2P53671 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK2P53671 AC007326.2-201ENST00000624224 7579 ntBASIC14.62□□□□□ -0.07
LIMK2P53671 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.61□□□□□ -0.07
LIMK2P53671 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms