Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF140P52738 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.34□□□□□ -0.11
ZNF140P52738 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF140P52738 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.34□□□□□ -0.11
ZNF140P52738 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF140P52738 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF140P52738 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF140P52738 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ZNF140P52738 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF140P52738 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF140P52738 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF140P52738 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF140P52738 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF140P52738 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF140P52738 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF140P52738 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF140P52738 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF140P52738 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF140P52738 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF140P52738 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF140P52738 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
ZNF140P52738 AGAP10P-201ENST00000454844 2418 ntBASIC14.33□□□□□ -0.12
ZNF140P52738 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ZNF140P52738 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ZNF140P52738 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF140P52738 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
ZNF140P52738 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF140P52738 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.33□□□□□ -0.12
ZNF140P52738 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF140P52738 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF140P52738 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.33□□□□□ -0.12
ZNF140P52738 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.33□□□□□ -0.12
ZNF140P52738 AL118558.3-201ENST00000607414 1079 ntBASIC14.33□□□□□ -0.12
ZNF140P52738 AC126755.1-201ENST00000525846 6405 ntBASIC14.33□□□□□ -0.12
ZNF140P52738 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
ZNF140P52738 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF140P52738 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF140P52738 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF140P52738 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ZNF140P52738 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF140P52738 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF140P52738 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF140P52738 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF140P52738 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF140P52738 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF140P52738 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZNF140P52738 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF140P52738 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
ZNF140P52738 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF140P52738 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ZNF140P52738 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ZNF140P52738 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF140P52738 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ZNF140P52738 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF140P52738 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF140P52738 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF140P52738 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF140P52738 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF140P52738 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF140P52738 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF140P52738 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 RCC2P8-201ENST00000502779 1035 ntBASIC14.32□□□□□ -0.12
ZNF140P52738 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF140P52738 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF140P52738 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF140P52738 AL451050.2-201ENST00000606967 682 ntBASIC14.32□□□□□ -0.12
ZNF140P52738 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF140P52738 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF140P52738 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF140P52738 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms