Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SLC6A12P48065 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC6A12P48065 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SLC6A12P48065 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SLC6A12P48065 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC6A12P48065 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SLC6A12P48065 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC6A12P48065 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SLC6A12P48065 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.91□□□□□ -0.18
SLC6A12P48065 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC6A12P48065 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC6A12P48065 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC6A12P48065 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
SLC6A12P48065 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC6A12P48065 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC6A12P48065 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.91□□□□□ -0.18
SLC6A12P48065 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.91□□□□□ -0.18
SLC6A12P48065 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.91□□□□□ -0.18
SLC6A12P48065 AC092299.1-201ENST00000632679 757 ntBASIC13.91□□□□□ -0.18
SLC6A12P48065 AC068587.8-201ENST00000641239 219 ntBASIC13.91□□□□□ -0.18
SLC6A12P48065 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC6A12P48065 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC6A12P48065 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.91□□□□□ -0.18
SLC6A12P48065 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SLC6A12P48065 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
SLC6A12P48065 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC6A12P48065 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC6A12P48065 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SLC6A12P48065 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC6A12P48065 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SLC6A12P48065 SHMT1P1-201ENST00000419974 1312 ntBASIC13.9□□□□□ -0.18
SLC6A12P48065 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC6A12P48065 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC6A12P48065 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SLC6A12P48065 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.9□□□□□ -0.18
SLC6A12P48065 AC018735.1-201ENST00000437208 1502 ntBASIC13.9□□□□□ -0.18
SLC6A12P48065 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
SLC6A12P48065 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC6A12P48065 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC6A12P48065 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC6A12P48065 AC072061.1-201ENST00000569710 2234 ntBASIC13.9□□□□□ -0.18
SLC6A12P48065 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC6A12P48065 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SLC6A12P48065 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.9□□□□□ -0.18
SLC6A12P48065 AC078875.1-201ENST00000431907 724 ntBASIC13.9□□□□□ -0.18
SLC6A12P48065 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.9□□□□□ -0.18
SLC6A12P48065 AC104982.3-201ENST00000581995 514 ntBASIC13.9□□□□□ -0.18
SLC6A12P48065 AC007663.3-201ENST00000609632 465 ntBASIC13.9□□□□□ -0.18
SLC6A12P48065 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC6A12P48065 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.9□□□□□ -0.18
SLC6A12P48065 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 AC004923.1-202ENST00000642106 209 ntBASIC13.9□□□□□ -0.18
SLC6A12P48065 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.9□□□□□ -0.18
SLC6A12P48065 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC6A12P48065 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SLC6A12P48065 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC6A12P48065 AL928654.5-201ENST00000624831 2501 ntBASIC13.9□□□□□ -0.18
SLC6A12P48065 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC6A12P48065 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC6A12P48065 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms