Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NCAPD3P42695 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC24.41■■□□□ 1.5
NCAPD3P42695 TUBB4AP1-201ENST00000450755 1325 ntBASIC24.41■■□□□ 1.5
NCAPD3P42695 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
NCAPD3P42695 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 AC024075.2-201ENST00000598112 1473 ntBASIC24.41■■□□□ 1.5
NCAPD3P42695 MIR181D-201ENST00000384853 137 ntBASIC24.41■■□□□ 1.5
NCAPD3P42695 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC24.41■■□□□ 1.5
NCAPD3P42695 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC24.41■■□□□ 1.5
NCAPD3P42695 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC24.41■■□□□ 1.5
NCAPD3P42695 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 RN7SL479P-201ENST00000472003 300 ntBASIC24.41■■□□□ 1.5
NCAPD3P42695 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC24.41■■□□□ 1.5
NCAPD3P42695 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC24.41■■□□□ 1.5
NCAPD3P42695 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC24.41■■□□□ 1.5
NCAPD3P42695 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC24.41■■□□□ 1.5
NCAPD3P42695 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
NCAPD3P42695 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCAPD3P42695 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC24.4■■□□□ 1.5
NCAPD3P42695 AC090505.1-201ENST00000430515 1834 ntBASIC24.4■■□□□ 1.5
NCAPD3P42695 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NCAPD3P42695 AL627095.1-201ENST00000414775 321 ntBASIC24.4■■□□□ 1.5
NCAPD3P42695 RPL3P9-201ENST00000463217 1183 ntBASIC24.4■■□□□ 1.5
NCAPD3P42695 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC24.4■■□□□ 1.5
NCAPD3P42695 RN7SL162P-201ENST00000579233 292 ntBASIC24.4■■□□□ 1.5
NCAPD3P42695 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC24.4■■□□□ 1.5
NCAPD3P42695 AL109954.3-201ENST00000615088 558 ntBASIC24.4■■□□□ 1.5
NCAPD3P42695 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC24.4■■□□□ 1.5
NCAPD3P42695 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NCAPD3P42695 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
NCAPD3P42695 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC24.4■■□□□ 1.5
NCAPD3P42695 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
NCAPD3P42695 AGAP7P-201ENST00000582299 2062 ntBASIC24.4■■□□□ 1.5
NCAPD3P42695 AGAP14-201ENST00000624701 2060 ntBASIC24.4■■□□□ 1.5
NCAPD3P42695 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NCAPD3P42695 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NCAPD3P42695 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
NCAPD3P42695 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NCAPD3P42695 AC091951.1-201ENST00000512854 2465 ntBASIC24.4■■□□□ 1.5
NCAPD3P42695 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC24.4■■□□□ 1.5
NCAPD3P42695 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NCAPD3P42695 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC24.4■■□□□ 1.5
NCAPD3P42695 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NCAPD3P42695 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC24.39■■□□□ 1.5
NCAPD3P42695 RN7SL646P-201ENST00000492969 297 ntBASIC24.39■■□□□ 1.5
NCAPD3P42695 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
NCAPD3P42695 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC24.39■■□□□ 1.5
NCAPD3P42695 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
NCAPD3P42695 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
NCAPD3P42695 AC079331.1-201ENST00000623200 1200 ntBASIC24.39■■□□□ 1.5
NCAPD3P42695 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
NCAPD3P42695 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC24.39■■□□□ 1.5
NCAPD3P42695 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
NCAPD3P42695 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
NCAPD3P42695 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC24.39■■□□□ 1.5
NCAPD3P42695 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NCAPD3P42695 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
NCAPD3P42695 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
NCAPD3P42695 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC24.39■■□□□ 1.49
NCAPD3P42695 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NCAPD3P42695 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NCAPD3P42695 AC026271.1-201ENST00000447794 1348 ntBASIC24.39■■□□□ 1.49
NCAPD3P42695 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
NCAPD3P42695 AL513477.1-201ENST00000602865 2407 ntBASIC24.39■■□□□ 1.49
NCAPD3P42695 AC105443.1-201ENST00000433754 712 ntBASIC24.38■■□□□ 1.49
NCAPD3P42695 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC24.38■■□□□ 1.49
NCAPD3P42695 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC24.38■■□□□ 1.49
NCAPD3P42695 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC24.38■■□□□ 1.49
NCAPD3P42695 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC24.38■■□□□ 1.49
NCAPD3P42695 AC063977.2-201ENST00000601996 421 ntBASIC24.38■■□□□ 1.49
NCAPD3P42695 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC24.38■■□□□ 1.49
NCAPD3P42695 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC24.38■■□□□ 1.49
NCAPD3P42695 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
NCAPD3P42695 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NCAPD3P42695 RN7SL832P-201ENST00000607781 1756 ntBASIC24.38■■□□□ 1.49
NCAPD3P42695 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
NCAPD3P42695 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC24.38■■□□□ 1.49
NCAPD3P42695 PPT1-215ENST00000641471 2368 ntBASIC24.38■■□□□ 1.49
NCAPD3P42695 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NCAPD3P42695 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NCAPD3P42695 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
NCAPD3P42695 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
NCAPD3P42695 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NCAPD3P42695 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC24.38■■□□□ 1.49
NCAPD3P42695 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC24.38■■□□□ 1.49
NCAPD3P42695 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NCAPD3P42695 PMF1-201ENST00000368273 884 ntTSL 2 BASIC24.38■■□□□ 1.49
NCAPD3P42695 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms