Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.8□□□□□ -0.04
FDFT1P37268 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.8□□□□□ -0.04
FDFT1P37268 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.8□□□□□ -0.04
FDFT1P37268 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
FDFT1P37268 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FDFT1P37268 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FDFT1P37268 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FDFT1P37268 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
FDFT1P37268 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
FDFT1P37268 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FDFT1P37268 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FDFT1P37268 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.8□□□□□ -0.04
FDFT1P37268 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FDFT1P37268 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FDFT1P37268 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FDFT1P37268 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FDFT1P37268 AC027612.1-201ENST00000445234 2395 ntBASIC14.8□□□□□ -0.04
FDFT1P37268 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
FDFT1P37268 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FDFT1P37268 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
FDFT1P37268 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.79□□□□□ -0.04
FDFT1P37268 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
FDFT1P37268 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.79□□□□□ -0.04
FDFT1P37268 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
FDFT1P37268 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.79□□□□□ -0.04
FDFT1P37268 HOMER2P2-201ENST00000451621 847 ntBASIC14.79□□□□□ -0.04
FDFT1P37268 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.79□□□□□ -0.04
FDFT1P37268 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.79□□□□□ -0.04
FDFT1P37268 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.79□□□□□ -0.04
FDFT1P37268 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.79□□□□□ -0.04
FDFT1P37268 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.79□□□□□ -0.04
FDFT1P37268 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.79□□□□□ -0.04
FDFT1P37268 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.79□□□□□ -0.04
FDFT1P37268 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 AC015818.8-201ENST00000587907 1519 ntBASIC14.79□□□□□ -0.04
FDFT1P37268 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.79□□□□□ -0.04
FDFT1P37268 AC132192.2-201ENST00000596206 1147 ntBASIC14.79□□□□□ -0.04
FDFT1P37268 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FDFT1P37268 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.78□□□□□ -0.04
FDFT1P37268 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.78□□□□□ -0.04
FDFT1P37268 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
FDFT1P37268 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.78□□□□□ -0.04
FDFT1P37268 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
FDFT1P37268 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
FDFT1P37268 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.78□□□□□ -0.04
FDFT1P37268 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.78□□□□□ -0.04
FDFT1P37268 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.78□□□□□ -0.04
FDFT1P37268 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.78□□□□□ -0.04
FDFT1P37268 RPL7P3-201ENST00000441388 714 ntBASIC14.78□□□□□ -0.04
FDFT1P37268 HIST2H2BB-201ENST00000449108 381 ntBASIC14.78□□□□□ -0.04
FDFT1P37268 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.78□□□□□ -0.04
FDFT1P37268 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.78□□□□□ -0.04
FDFT1P37268 DUX4L46-201ENST00000566845 751 ntBASIC14.78□□□□□ -0.04
FDFT1P37268 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.78□□□□□ -0.04
FDFT1P37268 AC130686.1-201ENST00000622936 2466 ntBASIC14.78□□□□□ -0.04
FDFT1P37268 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.78□□□□□ -0.04
FDFT1P37268 AC087386.2-201ENST00000623212 4637 ntBASIC14.78□□□□□ -0.04
FDFT1P37268 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
FDFT1P37268 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms