Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBRP36941 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBRP36941 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
LTBRP36941 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.56□□□□□ -0.08
LTBRP36941 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LTBRP36941 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
LTBRP36941 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.56□□□□□ -0.08
LTBRP36941 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBRP36941 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LTBRP36941 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LTBRP36941 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBRP36941 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC14.56□□□□□ -0.08
LTBRP36941 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.56□□□□□ -0.08
LTBRP36941 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LTBRP36941 OLA1P2-201ENST00000395519 1264 ntBASIC14.56□□□□□ -0.08
LTBRP36941 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC14.56□□□□□ -0.08
LTBRP36941 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBRP36941 GULOP-201ENST00000454030 748 ntBASIC14.56□□□□□ -0.08
LTBRP36941 VDAC1P11-201ENST00000458323 852 ntBASIC14.56□□□□□ -0.08
LTBRP36941 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC14.56□□□□□ -0.08
LTBRP36941 AP001462.1-201ENST00000594089 452 ntBASIC14.56□□□□□ -0.08
LTBRP36941 AC005865.2-202ENST00000635814 725 ntBASIC14.56□□□□□ -0.08
LTBRP36941 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC14.56□□□□□ -0.08
LTBRP36941 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.56□□□□□ -0.08
LTBRP36941 LILRP2-202ENST00000413572 1383 ntBASIC14.56□□□□□ -0.08
LTBRP36941 AC018529.2-202ENST00000611482 3087 ntBASIC14.56□□□□□ -0.08
LTBRP36941 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBRP36941 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBRP36941 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBRP36941 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LTBRP36941 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LTBRP36941 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBRP36941 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.55□□□□□ -0.08
LTBRP36941 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LTBRP36941 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.55□□□□□ -0.08
LTBRP36941 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBRP36941 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC14.55□□□□□ -0.08
LTBRP36941 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBRP36941 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.55□□□□□ -0.08
LTBRP36941 CASP2-203ENST00000392925 616 ntTSL 3 BASIC14.55□□□□□ -0.08
LTBRP36941 MED15P3-201ENST00000413613 326 ntBASIC14.55□□□□□ -0.08
LTBRP36941 AL359092.2-201ENST00000423330 585 ntBASIC14.55□□□□□ -0.08
LTBRP36941 HNRNPA1P10-201ENST00000444945 962 ntBASIC14.55□□□□□ -0.08
LTBRP36941 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC14.55□□□□□ -0.08
LTBRP36941 AP000533.1-201ENST00000456143 1177 ntBASIC14.55□□□□□ -0.08
LTBRP36941 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBRP36941 COQ10BP2-201ENST00000513804 724 ntBASIC14.55□□□□□ -0.08
LTBRP36941 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC14.55□□□□□ -0.08
LTBRP36941 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.55□□□□□ -0.08
LTBRP36941 KF455155.1-201ENST00000604493 303 ntBASIC14.55□□□□□ -0.08
LTBRP36941 MIR8071-1-201ENST00000616769 65 ntBASIC14.55□□□□□ -0.08
LTBRP36941 MIR8071-2-201ENST00000616772 65 ntBASIC14.55□□□□□ -0.08
LTBRP36941 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.55□□□□□ -0.08
LTBRP36941 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBRP36941 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBRP36941 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LTBRP36941 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.54□□□□□ -0.08
LTBRP36941 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LTBRP36941 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.54□□□□□ -0.08
LTBRP36941 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
LTBRP36941 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.54□□□□□ -0.08
LTBRP36941 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LTBRP36941 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms