Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.62□□□□□ -0.23
CHMP24386 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHMP24386 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.62□□□□□ -0.23
CHMP24386 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
CHMP24386 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.62□□□□□ -0.23
CHMP24386 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.61□□□□□ -0.23
CHMP24386 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 AL354989.2-201ENST00000435838 1540 ntBASIC13.61□□□□□ -0.23
CHMP24386 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.61□□□□□ -0.23
CHMP24386 MIR1202-201ENST00000408529 83 ntBASIC13.61□□□□□ -0.23
CHMP24386 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.61□□□□□ -0.23
CHMP24386 FAM8A4P-201ENST00000435433 1213 ntBASIC13.61□□□□□ -0.23
CHMP24386 AL355994.2-201ENST00000447882 704 ntBASIC13.61□□□□□ -0.23
CHMP24386 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 FTLP10-202ENST00000505798 471 ntBASIC13.61□□□□□ -0.23
CHMP24386 AC026434.2-201ENST00000506094 1078 ntBASIC13.61□□□□□ -0.23
CHMP24386 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 AL583810.1-201ENST00000553344 1045 ntBASIC13.61□□□□□ -0.23
CHMP24386 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.61□□□□□ -0.23
CHMP24386 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.61□□□□□ -0.23
CHMP24386 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.61□□□□□ -0.23
CHMP24386 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.61□□□□□ -0.23
CHMP24386 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CHMP24386 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CHMP24386 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.61□□□□□ -0.23
CHMP24386 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.61□□□□□ -0.23
CHMP24386 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CHMP24386 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.61□□□□□ -0.23
CHMP24386 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CHMP24386 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHMP24386 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.6□□□□□ -0.23
CHMP24386 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 AC011840.2-201ENST00000563063 1520 ntBASIC13.6□□□□□ -0.23
CHMP24386 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CHMP24386 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.6□□□□□ -0.23
CHMP24386 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.6□□□□□ -0.23
CHMP24386 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.6□□□□□ -0.23
CHMP24386 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.6□□□□□ -0.23
CHMP24386 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.6□□□□□ -0.23
CHMP24386 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.6□□□□□ -0.23
CHMP24386 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.6□□□□□ -0.23
CHMP24386 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.6□□□□□ -0.23
CHMP24386 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 AC010328.2-201ENST00000597698 1111 ntBASIC13.6□□□□□ -0.23
CHMP24386 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.6□□□□□ -0.23
CHMP24386 AC138466.3-201ENST00000619983 221 ntBASIC13.6□□□□□ -0.23
CHMP24386 MIR6799-201ENST00000620297 69 ntBASIC13.6□□□□□ -0.23
CHMP24386 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.6□□□□□ -0.23
CHMP24386 AL033527.4-201ENST00000641026 673 ntBASIC13.6□□□□□ -0.23
CHMP24386 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms