Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ETV2-207ENST00000619399 994 ntTSL 5 BASIC15.98■□□□□ 0.15
COL11A1P12107 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
COL11A1P12107 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL11A1P12107 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL11A1P12107 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.98■□□□□ 0.15
COL11A1P12107 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.98■□□□□ 0.15
COL11A1P12107 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL11A1P12107 DBET-201ENST00000630918 3363 ntBASIC15.98■□□□□ 0.15
COL11A1P12107 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.98■□□□□ 0.15
COL11A1P12107 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL11A1P12107 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL11A1P12107 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL11A1P12107 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL11A1P12107 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
COL11A1P12107 PTGER4P2-201ENST00000328411 252 ntBASIC15.98■□□□□ 0.15
COL11A1P12107 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL11A1P12107 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL11A1P12107 KRT18P62-201ENST00000446618 1287 ntBASIC15.98■□□□□ 0.15
COL11A1P12107 PTGER4P3-201ENST00000458150 252 ntBASIC15.98■□□□□ 0.15
COL11A1P12107 COQ10BP2-201ENST00000513804 724 ntBASIC15.98■□□□□ 0.15
COL11A1P12107 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.98■□□□□ 0.15
COL11A1P12107 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.98■□□□□ 0.15
COL11A1P12107 SRP14-204ENST00000558720 780 ntTSL 2 BASIC15.98■□□□□ 0.15
COL11A1P12107 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
COL11A1P12107 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC15.98■□□□□ 0.15
COL11A1P12107 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.98■□□□□ 0.15
COL11A1P12107 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
COL11A1P12107 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL11A1P12107 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
COL11A1P12107 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.98■□□□□ 0.15
COL11A1P12107 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
COL11A1P12107 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.98■□□□□ 0.15
COL11A1P12107 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
COL11A1P12107 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.97■□□□□ 0.15
COL11A1P12107 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
COL11A1P12107 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
COL11A1P12107 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
COL11A1P12107 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.97■□□□□ 0.15
COL11A1P12107 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
COL11A1P12107 AC092115.1-201ENST00000566277 1402 ntBASIC15.97■□□□□ 0.15
COL11A1P12107 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
COL11A1P12107 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.97■□□□□ 0.15
COL11A1P12107 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.97■□□□□ 0.15
COL11A1P12107 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
COL11A1P12107 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
COL11A1P12107 GGTLC4P-201ENST00000402176 664 ntBASIC15.97■□□□□ 0.15
COL11A1P12107 MIR1307-201ENST00000408840 149 ntBASIC15.97■□□□□ 0.15
COL11A1P12107 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.97■□□□□ 0.15
COL11A1P12107 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.97■□□□□ 0.15
COL11A1P12107 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
COL11A1P12107 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
COL11A1P12107 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.97■□□□□ 0.15
COL11A1P12107 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.97■□□□□ 0.15
COL11A1P12107 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.97■□□□□ 0.15
COL11A1P12107 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
COL11A1P12107 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.97■□□□□ 0.15
COL11A1P12107 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL11A1P12107 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.96■□□□□ 0.15
COL11A1P12107 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.96■□□□□ 0.15
COL11A1P12107 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
COL11A1P12107 RNA5SP491-201ENST00000362936 118 ntBASIC15.96■□□□□ 0.15
COL11A1P12107 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC15.96■□□□□ 0.15
COL11A1P12107 OR7E115P-201ENST00000382617 1024 ntBASIC15.96■□□□□ 0.15
COL11A1P12107 MIR1301-201ENST00000408518 82 ntBASIC15.96■□□□□ 0.15
COL11A1P12107 GOLGA6L16P-201ENST00000441780 1299 ntBASIC15.96■□□□□ 0.15
COL11A1P12107 AC092903.1-201ENST00000466506 262 ntBASIC15.96■□□□□ 0.15
COL11A1P12107 CISD2-202ENST00000503643 808 ntTSL 2 BASIC15.96■□□□□ 0.15
COL11A1P12107 FAM86B3P-203ENST00000523992 854 ntBASIC15.96■□□□□ 0.15
COL11A1P12107 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
COL11A1P12107 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
COL11A1P12107 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.96■□□□□ 0.15
COL11A1P12107 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
COL11A1P12107 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
COL11A1P12107 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.96■□□□□ 0.15
COL11A1P12107 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms