Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.13□□□□□ -0.31
CLUP10909 CICP20-201ENST00000443330 2801 ntBASIC13.13□□□□□ -0.31
CLUP10909 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLUP10909 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.13□□□□□ -0.31
CLUP10909 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CLUP10909 AL590440.2-201ENST00000641973 1595 ntBASIC13.13□□□□□ -0.31
CLUP10909 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CLUP10909 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.13□□□□□ -0.31
CLUP10909 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 AC087499.6-201ENST00000411576 835 ntBASIC13.13□□□□□ -0.31
CLUP10909 PMS2P2-201ENST00000425039 1128 ntBASIC13.13□□□□□ -0.31
CLUP10909 AL162726.2-201ENST00000438986 1017 ntBASIC13.13□□□□□ -0.31
CLUP10909 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CLUP10909 CYMP-203ENST00000474680 1263 ntBASIC13.13□□□□□ -0.31
CLUP10909 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.13□□□□□ -0.31
CLUP10909 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.13□□□□□ -0.31
CLUP10909 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.13□□□□□ -0.31
CLUP10909 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.13□□□□□ -0.31
CLUP10909 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLUP10909 AC138466.3-201ENST00000619983 221 ntBASIC13.13□□□□□ -0.31
CLUP10909 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.13□□□□□ -0.31
CLUP10909 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.13□□□□□ -0.31
CLUP10909 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CLUP10909 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CLUP10909 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.13□□□□□ -0.31
CLUP10909 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.13□□□□□ -0.31
CLUP10909 COL6A4P2-202ENST00000504443 2753 ntBASIC13.13□□□□□ -0.31
CLUP10909 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.13□□□□□ -0.31
CLUP10909 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.13□□□□□ -0.31
CLUP10909 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLUP10909 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 AC099521.3-201ENST00000624251 2938 ntBASIC13.12□□□□□ -0.31
CLUP10909 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 AC092053.3-201ENST00000641308 4975 ntBASIC13.12□□□□□ -0.31
CLUP10909 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.12□□□□□ -0.31
CLUP10909 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLUP10909 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CLUP10909 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.12□□□□□ -0.31
CLUP10909 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CLUP10909 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CLUP10909 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CLUP10909 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.12□□□□□ -0.31
CLUP10909 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.12□□□□□ -0.31
CLUP10909 TSPY16P-201ENST00000449843 468 ntBASIC13.12□□□□□ -0.31
CLUP10909 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.12□□□□□ -0.31
CLUP10909 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.12□□□□□ -0.31
CLUP10909 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.12□□□□□ -0.31
CLUP10909 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.12□□□□□ -0.31
CLUP10909 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.12□□□□□ -0.31
CLUP10909 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.12□□□□□ -0.31
CLUP10909 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CLUP10909 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms