Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.12□□□□□ -0.31
FREM3P0C091 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.12□□□□□ -0.31
FREM3P0C091 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.12□□□□□ -0.31
FREM3P0C091 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.12□□□□□ -0.31
FREM3P0C091 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 AL008707.1-201ENST00000422498 534 ntBASIC13.12□□□□□ -0.31
FREM3P0C091 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.12□□□□□ -0.31
FREM3P0C091 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 AC006122.1-201ENST00000493323 440 ntBASIC13.12□□□□□ -0.31
FREM3P0C091 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.12□□□□□ -0.31
FREM3P0C091 AL161670.2-201ENST00000557650 1227 ntBASIC13.12□□□□□ -0.31
FREM3P0C091 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.12□□□□□ -0.31
FREM3P0C091 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.12□□□□□ -0.31
FREM3P0C091 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.12□□□□□ -0.31
FREM3P0C091 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.11□□□□□ -0.31
FREM3P0C091 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.11□□□□□ -0.31
FREM3P0C091 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.11□□□□□ -0.31
FREM3P0C091 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
FREM3P0C091 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.11□□□□□ -0.31
FREM3P0C091 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 AC012441.2-201ENST00000444843 739 ntBASIC13.11□□□□□ -0.31
FREM3P0C091 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.11□□□□□ -0.31
FREM3P0C091 AC124068.2-201ENST00000569473 1109 ntBASIC13.11□□□□□ -0.31
FREM3P0C091 AC007718.1-201ENST00000621078 280 ntBASIC13.11□□□□□ -0.31
FREM3P0C091 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
FREM3P0C091 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 RN7SL832P-201ENST00000607781 1756 ntBASIC13.11□□□□□ -0.31
FREM3P0C091 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
FREM3P0C091 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
FREM3P0C091 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
FREM3P0C091 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 AC015802.1-201ENST00000588104 1449 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
FREM3P0C091 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms