Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 AHCYP4-201ENST00000419201 1315 ntBASIC14.65□□□□□ -0.06
HLA-DQB2P05538 CCT8L1P-201ENST00000465400 1674 ntBASIC14.65□□□□□ -0.06
HLA-DQB2P05538 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 AC067750.1-201ENST00000608826 6545 ntBASIC14.64□□□□□ -0.07
HLA-DQB2P05538 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 LINC02486-201ENST00000604157 3000 ntBASIC14.64□□□□□ -0.07
HLA-DQB2P05538 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 FAM86MP-201ENST00000340703 885 ntBASIC14.64□□□□□ -0.07
HLA-DQB2P05538 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 AC078875.1-201ENST00000431907 724 ntBASIC14.64□□□□□ -0.07
HLA-DQB2P05538 NKAIN1P1-201ENST00000435754 582 ntBASIC14.64□□□□□ -0.07
HLA-DQB2P05538 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 AC013355.1-201ENST00000562625 723 ntBASIC14.64□□□□□ -0.07
HLA-DQB2P05538 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 AL591471.1-201ENST00000621855 229 ntBASIC14.64□□□□□ -0.07
HLA-DQB2P05538 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DQB2P05538 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.63□□□□□ -0.07
HLA-DQB2P05538 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.63□□□□□ -0.07
HLA-DQB2P05538 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 AC092580.1-201ENST00000433998 658 ntBASIC14.63□□□□□ -0.07
HLA-DQB2P05538 AC007274.1-201ENST00000439805 662 ntBASIC14.63□□□□□ -0.07
HLA-DQB2P05538 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms