Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CNOT4O95628 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CNOT4O95628 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CNOT4O95628 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 AL390755.1-201ENST00000623716 2027 ntBASIC12.95□□□□□ -0.34
CNOT4O95628 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CNOT4O95628 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 AC018735.1-201ENST00000437208 1502 ntBASIC12.95□□□□□ -0.34
CNOT4O95628 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.95□□□□□ -0.34
CNOT4O95628 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CNOT4O95628 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CNOT4O95628 DPM3-202ENST00000368399 517 ntBASIC12.95□□□□□ -0.34
CNOT4O95628 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CNOT4O95628 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.95□□□□□ -0.34
CNOT4O95628 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.95□□□□□ -0.34
CNOT4O95628 AC005730.2-201ENST00000564549 1184 ntBASIC12.95□□□□□ -0.34
CNOT4O95628 MIR4783-201ENST00000580343 82 ntBASIC12.95□□□□□ -0.34
CNOT4O95628 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.95□□□□□ -0.34
CNOT4O95628 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.95□□□□□ -0.34
CNOT4O95628 AC138649.2-201ENST00000615886 705 ntBASIC12.95□□□□□ -0.34
CNOT4O95628 MIR6727-201ENST00000620702 65 ntBASIC12.95□□□□□ -0.34
CNOT4O95628 AC100757.4-201ENST00000626934 759 ntBASIC12.95□□□□□ -0.34
CNOT4O95628 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 GRK6P1-201ENST00000400595 1711 ntBASIC12.95□□□□□ -0.34
CNOT4O95628 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CNOT4O95628 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.95□□□□□ -0.34
CNOT4O95628 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.95□□□□□ -0.34
CNOT4O95628 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.95□□□□□ -0.34
CNOT4O95628 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CNOT4O95628 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CNOT4O95628 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CNOT4O95628 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CNOT4O95628 MIR193BHG-211ENST00000641433 5365 ntBASIC12.95□□□□□ -0.34
CNOT4O95628 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 KHSRPP1-201ENST00000427983 1768 ntBASIC12.94□□□□□ -0.34
CNOT4O95628 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.94□□□□□ -0.34
CNOT4O95628 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CNOT4O95628 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CNOT4O95628 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CNOT4O95628 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 AC004899.1-201ENST00000424687 1714 ntBASIC12.94□□□□□ -0.34
CNOT4O95628 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.94□□□□□ -0.34
CNOT4O95628 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.94□□□□□ -0.34
CNOT4O95628 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CNOT4O95628 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.94□□□□□ -0.34
CNOT4O95628 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CNOT4O95628 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.94□□□□□ -0.34
CNOT4O95628 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CNOT4O95628 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CNOT4O95628 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CNOT4O95628 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.94□□□□□ -0.34
CNOT4O95628 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.94□□□□□ -0.34
CNOT4O95628 HINT2P1-201ENST00000419438 481 ntBASIC12.94□□□□□ -0.34
CNOT4O95628 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.94□□□□□ -0.34
CNOT4O95628 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.94□□□□□ -0.34
CNOT4O95628 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.94□□□□□ -0.34
CNOT4O95628 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CNOT4O95628 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 AC013355.1-201ENST00000562625 723 ntBASIC12.94□□□□□ -0.34
CNOT4O95628 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.94□□□□□ -0.34
CNOT4O95628 NDUFV2P1-201ENST00000596415 907 ntBASIC12.94□□□□□ -0.34
CNOT4O95628 MIR6074-201ENST00000612054 107 ntBASIC12.94□□□□□ -0.34
CNOT4O95628 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.94□□□□□ -0.34
CNOT4O95628 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
CNOT4O95628 Z98259.2-201ENST00000641583 609 ntBASIC12.94□□□□□ -0.34
CNOT4O95628 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.94□□□□□ -0.34
CNOT4O95628 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.94□□□□□ -0.34
CNOT4O95628 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms